Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma02g01339 | ATGACTACATTAGCTAGTGCTTCTGAAATTGTTGAATCAACAGAAGAATTTGATTCTGAGAAAGCTGGGACAAGTTACACGATAGATGTAGGAAAAAGGTTTTCAATAGAGGATGACATTAATCGTCTGTTTCAGGCAATTGATATCAGAACATTATGTAACAGGTCAGGTCAGCAACATGGAGTTGATAAAGATGCGTTGCAAAAGAGTGCGATGAAGAGACCGATGAGAGTGGGTTCATCTCACATGGCAGGGATTGGAATTTCTGAGCCTGCAAGCTTAAAGCAGGCTTTGAGGGGCTTATGCATATCTCAGGCTGCTGCAAAGAGGTTAACAAGGTCTTTAGGTTCACCTGGAATCTCTGAAGCAGGAACTATTAAAAGGTTGTATAAGGCTGTGGTGGTTGAGGCCAGTGGATCTGATGTGCGAATAAATGAAAGCAAAGAAAATTTGGTAGAAATTTCCTTTGTTTCAGAAAGAATTATGTCTACTTTTCAGAATAAGATGCCTGAATTGTTGCATAAAACTGAGGCAGATATATCAAACCAGGGTGCTGAGTCTTCACCTTTTAAGAACACTGGGGTATCAGAAGAGGCAAATGTGGATAGATTGATGTCAAAGGATCTTGTAGAAGTGACAAGTATAAAGCCACTTAAATCTCCTTCCTTTACTCCTTCTGGTGAGAAGGATCTGACTCTGAACAGCTTGGATAATTCCTCAACTGAAGATTTGGCAAAAAATTCAGTGCCAGAGGAGAAAGGTACAATGCGTTGTTTATCCTCTCTATCAAGCTCTGGATCTGTTATTTGGCCGAACAAATCAGCTTTCAATAATACACGTTTCGTCAAACCTATTTTCAGGATCAAAAACTCTGTCAAGAAGAAAGCAAAACTTGAACCCATTTCCTCCCCTAGCACGTTTGAAATGCGTACAGTGATGGTTGACACTGATTTGGGTTCCATAGCAGAAAAGTTTGAGAACCGAATGCCAGAAAATGCCCAGAATCATGAGAGTAAAGAAAAAGAGATAGGTTCCTCTATCTCCAGTAGCACAACTTTAGGTATTGAAGTAAGTGCAAATCTGGTAAACACAGAGTCCAGTGGACCTGGTACATCTCTCAACTGCTGTAACAGGATCAAACCAACTATTATGCCATTCAATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTAGTATTGGTGAATGTAGCCATAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTTGTAGTGGAGTAAGGCCTCACATGTCAAAGGACTTGAAATGGGAATCTATCCACCATATTCAAGATCAACATAAATGCCTAAGTCTGAAAAACTTCAATCTGTTAAGGAGACTTGGTCTCGGGGACATTGGGACTGTATATCTCTCTGAGCTATGCGATTCTAGCTGTCTATTTGCTATCAAAGTGATGGACAAGGAGTTCTTGGCAAGCAGAAAAAAAATACTTCGGGCACAAACTGAGAGAGAGATACTGGAAATACTTGACCATCCATTTCTCCCTACACTATATGCTCATTTTGAGACGGATGAGCAATCATGCTTGGTCATGGACTACTGTCCTGGTGGAGATCTCCATGTGCTGCAACAAAAGCAACCATGCAAGAGTTTCTCTGAGCATGCAGTCAGGTTCTATGTTGCCGAGATTCTTCTTGCCCTGGAGTATTTACACATGCTAGGCGTTATTTACCGAAACCTGAAACCCGAAAATGTTCTGGTTCGAGAAGATGGACACATAATGCTCACAGATTTTGATTTGTCTCTTAGATGTGCTGTTAATCCAATGCTGCTTCAATCATCATCTCCAGTTGTGGAATCCACCAAGAGGAAGTTGAATCCCTGTGATGAATCTAGTTGCATTGACCATTTCTGCCTCCACCCATCCTGGCAGGTCTCATGCTTCACCCCCAAAGTTTTATCTGCTCCATACAAATCTCGGAGAACAAAAGCAGACAATCAAGCTAGTCTATTACCACAGCTTATTGTCGAGCCAACTGGTGTGCAGTCCAATTCATTTGTTGGAACCCACGAATACCTCGCCCCTGAGATTGTCAAGGGTGATGGCCATGGGAGTGCTGTTGATTGGTGGACTTACGGGATTTTCCTGTTTGAGCTACTCTATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCACACTCTCAAGTTCCCCGATAGCCCCATAGTTAGCTTTCATGCCAGAGATCTAATCAGATGTCTGTTGGCAAAGGAGCCTGAAAACCGATTAGGCGCAACAAAAGGAGCTATTGAGATTAAGCAGCATCCATTTTTTGAAGGCATCAATTGGGCTCTGATACGTTGTGCAGTTCCACCTGAGCTTCCCAAGTTCTTCGACGATGGAACTGGTGCAATGCCAGTGGATCCCGGGGAGAACAGAAAGTGTAGAGATCTCGAGAATATGGAAGCGGATGCAGCAATCTTCGACCTGTTTTAG | 2532 | 42.61 | MTTLASASEIVESTEEFDSEKAGTSYTIDVGKRFSIEDDINRLFQAIDIRTLCNRSGQQHGVDKDALQKSAMKRPMRVGSSHMAGIGISEPASLKQALRGLCISQAAAKRLTRSLGSPGISEAGTIKRLYKAVVVEASGSDVRINESKENLVEISFVSERIMSTFQNKMPELLHKTEADISNQGAESSPFKNTGVSEEANVDRLMSKDLVEVTSIKPLKSPSFTPSGEKDLTLNSLDNSSTEDLAKNSVPEEKGTMRCLSSLSSSGSVIWPNKSAFNNTRFVKPIFRIKNSVKKKAKLEPISSPSTFEMRTVMVDTDLGSIAEKFENRMPENAQNHESKEKEIGSSISSSTTLGIEVSANLVNTESSGPGTSLNCCNRIKPTIMPFNERSRSREKGMFSQSSKSSSIGECSHSPSISGESILSGSSCSGVRPHMSKDLKWESIHHIQDQHKCLSLKNFNLLRRLGLGDIGTVYLSELCDSSCLFAIKVMDKEFLASRKKILRAQTEREILEILDHPFLPTLYAHFETDEQSCLVMDYCPGGDLHVLQQKQPCKSFSEHAVRFYVAEILLALEYLHMLGVIYRNLKPENVLVREDGHIMLTDFDLSLRCAVNPMLLQSSSPVVESTKRKLNPCDESSCIDHFCLHPSWQVSCFTPKVLSAPYKSRRTKADNQASLLPQLIVEPTGVQSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSHTLKFPDSPIVSFHARDLIRCLLAKEPENRLGATKGAIEIKQHPFFEGINWALIRCAVPPELPKFFDDGTGAMPVDPGENRKCRDLENMEADAAIFDLF | 843 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7843244 | 7846243 | + | CmaCh02G013390.1 | Cma02g01339 | 289090 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma02g01339 | 843 | CDD | STKc_phototropin_like | 456 | 808 | - | - | |
Cma02g01339 | 843 | SUPERFAMILY | Protein kinase-like (PK-like) | 433 | 808 | IPR011009 | - | |
Cma02g01339 | 843 | MobiDBLite | consensus disorder prediction | 389 | 428 | - | - | |
Cma02g01339 | 843 | Gene3D | Phosphorylase Kinase; domain 1 | 458 | 541 | - | - | |
Cma02g01339 | 843 | MobiDBLite | consensus disorder prediction | 221 | 245 | - | - | |
Cma02g01339 | 843 | PANTHER | SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 | 1 | 816 | - | - | |
Cma02g01339 | 843 | MobiDBLite | consensus disorder prediction | 221 | 252 | - | - | |
Cma02g01339 | 843 | PANTHER | FLIPPASE KINASE 1-RELATED | 1 | 816 | - | - | |
Cma02g01339 | 843 | MobiDBLite | consensus disorder prediction | 397 | 428 | - | - | |
Cma02g01339 | 843 | ProSiteProfiles | Protein kinase domain profile. | 458 | 790 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma02g01339 | 843 | Gene3D | Transferase(Phosphotransferase) domain 1 | 542 | 799 | - | - | |
Cma02g01339 | 843 | Pfam | Protein kinase domain | 459 | 607 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma02g01339 | 843 | Pfam | Protein kinase domain | 686 | 790 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma02g01339 | Cma20g00180 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma02g01339 | Cma-Chr2:7843244 | Cma20g00180 | Cma-Chr20:873534 | 0 | dispersed | |
Cma02g01337 | Cma-Chr2:7835428 | Cma02g01339 | Cma-Chr2:7843244 | 3.52E-135 | proximal | |
Cma02g01339 | Cma-Chr2:7843244 | Cma03g01169 | Cma-Chr3:7831679 | 0 | wgd | |
Cma02g01339 | Cma-Chr2:7843244 | Cma07g00864 | Cma-Chr7:4029515 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68372 | PF00069 | Pkinase | 1.50E-33 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma02g01339 | - | - | cpep:111777395 | 1341.25 |