Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g01155 ATGGGTGGTGATGGGTTTGTAATCCCTGTGGAATCTCAGGTTAGTTCGGTGAAGAAGAAGAAGAAGCAGACTACGACGAAGAAGAAGACTACTGCGGTTTCCAGAAGCTGGGTTTCGTTGGACCGTGAAGGAAGGAGTACGATTTTGGATGTGGATAAGTATGTCATTATGGAAAGAGTTCAGATTAATGCCAGAGATCTTCGGCTTCTTGATCCTTTGCTGTCCTATCCTTCCACTATCTTGGGTAGAGAAAGAGTAATTGTTCTCAATTTGGAGCATATCAAATCTATTATCACGGCAGACGAGGTGTTGCTTAGAGATCCAATGGATGAAAATGTAGTTCCAATTGTCGAAGAACTGCAGAGACGGCTGCCTTCGACAAATTCCCTATACCAAGGGCAAGGGGAAGAAGAAGAGCCATCTACCACCCAAAATGAGTTGGCTGAAAACGAATTTCCATTTGAATTTCGTGCTTTAGAGGTCGCACTCGAAGCAATTTGTAGTTTTCTTGATGCACGCACAAGAGAATTAGAGACTGATACTTATCCTGCTTTAGATGAGCTGACCTCCAAGATTAGCAGTCGTAACTTGGACCGAGTGCGCAAACTGAAGAGTGCAATGACAAGGTTGACAAATCGGGTGCAAAAGGTTAGGGATGAACTTGAACAACTTCTGGATGATGATGACGACATGGCAGAACTTTACTTGTCACGTAAAGTAGCTGGCACCCCTGAAAGTGGCTCAGGGACTCCAATCTGGTTTCTTGCTTCTCCTAAGGACTATTCAAAGATCTCTAGAACAAGTAGAGTGAGTGCGATTACTATACGAGGAGAGAATGATGTTGAGGAACTTGAAATGCTACTCGAGGCTTACTTTATGCAAATTGAAGGTACATTAAACAAACTAATCACGTTGCGGGAGTATATTGATGACACAGAGGATTACATCAATATTCAGCTTGACAATCACAGGAATCAACTCATTCAGCTAGAACTCTTTTTGAGCTCTGGGACTGTTTGTTTGTCTATTTATTCTTTAGTGACTGCAATATTTGGAATGAATATACCATACACCTGGAAGGAAGATCATGAACATGTATTCAAATGGGTGGTCATCGTGACAGGAATAGTTTGTGCAACCATTTATGTGTCACTAAGCTCATATGCCCGATACAAAGGTCTCGTTGGTTCTTGA 1194 42.13 MGGDGFVIPVESQVSSVKKKKKQTTTKKKTTAVSRSWVSLDREGRSTILDVDKYVIMERVQINARDLRLLDPLLSYPSTILGRERVIVLNLEHIKSIITADEVLLRDPMDENVVPIVEELQRRLPSTNSLYQGQGEEEEPSTTQNELAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGTPESGSGTPIWFLASPKDYSKISRTSRVSAITIRGENDVEELEMLLEAYFMQIEGTLNKLITLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWKEDHEHVFKWVVIVTGIVCATIYVSLSSYARYKGLVGS* 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11253390 11259711 - CsaV3_2G013710.1 Csa02g01155 519212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g01155 397 Gene3D - 18 108 - -
Csa02g01155 397 Pfam CorA-like Mg2+ transporter protein 283 382 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Csa02g01155 397 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 333 384 IPR045863 -
Csa02g01155 397 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 397 IPR039204 -
Csa02g01155 397 Gene3D Magnesium transport protein CorA, transmembrane region 334 388 - -
Csa02g01155 397 Gene3D Magnesium transport protein CorA, transmembrane region 111 327 - -
Csa02g01155 397 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 6 397 - -
Csa02g01155 397 CDD Mrs2_Mfm1p-like 37 394 IPR039204 -
Csa02g01155 397 Coils Coil 200 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01103 Csa-Chr2:10764690 Csa02g01155 Csa-Chr2:11253390 0 dispersed
Csa02g01155 Csa-Chr2:11253390 Csa03g02968 Csa-Chr3:28242018 8.37E-115 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g01155 K16075 - csv:101220452 731.095