Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g01155 | ATGGGTGGTGATGGGTTTGTAATCCCTGTGGAATCTCAGGTTAGTTCGGTGAAGAAGAAGAAGAAGCAGACTACGACGAAGAAGAAGACTACTGCGGTTTCCAGAAGCTGGGTTTCGTTGGACCGTGAAGGAAGGAGTACGATTTTGGATGTGGATAAGTATGTCATTATGGAAAGAGTTCAGATTAATGCCAGAGATCTTCGGCTTCTTGATCCTTTGCTGTCCTATCCTTCCACTATCTTGGGTAGAGAAAGAGTAATTGTTCTCAATTTGGAGCATATCAAATCTATTATCACGGCAGACGAGGTGTTGCTTAGAGATCCAATGGATGAAAATGTAGTTCCAATTGTCGAAGAACTGCAGAGACGGCTGCCTTCGACAAATTCCCTATACCAAGGGCAAGGGGAAGAAGAAGAGCCATCTACCACCCAAAATGAGTTGGCTGAAAACGAATTTCCATTTGAATTTCGTGCTTTAGAGGTCGCACTCGAAGCAATTTGTAGTTTTCTTGATGCACGCACAAGAGAATTAGAGACTGATACTTATCCTGCTTTAGATGAGCTGACCTCCAAGATTAGCAGTCGTAACTTGGACCGAGTGCGCAAACTGAAGAGTGCAATGACAAGGTTGACAAATCGGGTGCAAAAGGTTAGGGATGAACTTGAACAACTTCTGGATGATGATGACGACATGGCAGAACTTTACTTGTCACGTAAAGTAGCTGGCACCCCTGAAAGTGGCTCAGGGACTCCAATCTGGTTTCTTGCTTCTCCTAAGGACTATTCAAAGATCTCTAGAACAAGTAGAGTGAGTGCGATTACTATACGAGGAGAGAATGATGTTGAGGAACTTGAAATGCTACTCGAGGCTTACTTTATGCAAATTGAAGGTACATTAAACAAACTAATCACGTTGCGGGAGTATATTGATGACACAGAGGATTACATCAATATTCAGCTTGACAATCACAGGAATCAACTCATTCAGCTAGAACTCTTTTTGAGCTCTGGGACTGTTTGTTTGTCTATTTATTCTTTAGTGACTGCAATATTTGGAATGAATATACCATACACCTGGAAGGAAGATCATGAACATGTATTCAAATGGGTGGTCATCGTGACAGGAATAGTTTGTGCAACCATTTATGTGTCACTAAGCTCATATGCCCGATACAAAGGTCTCGTTGGTTCTTGA | 1194 | 42.13 | MGGDGFVIPVESQVSSVKKKKKQTTTKKKTTAVSRSWVSLDREGRSTILDVDKYVIMERVQINARDLRLLDPLLSYPSTILGRERVIVLNLEHIKSIITADEVLLRDPMDENVVPIVEELQRRLPSTNSLYQGQGEEEEPSTTQNELAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGTPESGSGTPIWFLASPKDYSKISRTSRVSAITIRGENDVEELEMLLEAYFMQIEGTLNKLITLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWKEDHEHVFKWVVIVTGIVCATIYVSLSSYARYKGLVGS* | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 11253390 | 11259711 | - | CsaV3_2G013710.1 | Csa02g01155 | 519212 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g01155 | 397 | Gene3D | - | 18 | 108 | - | - | |
Csa02g01155 | 397 | Pfam | CorA-like Mg2+ transporter protein | 283 | 382 | IPR002523 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 | |
Csa02g01155 | 397 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 333 | 384 | IPR045863 | - | |
Csa02g01155 | 397 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 6 | 397 | IPR039204 | - | |
Csa02g01155 | 397 | Gene3D | Magnesium transport protein CorA, transmembrane region | 334 | 388 | - | - | |
Csa02g01155 | 397 | Gene3D | Magnesium transport protein CorA, transmembrane region | 111 | 327 | - | - | |
Csa02g01155 | 397 | PANTHER | MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN | 6 | 397 | - | - | |
Csa02g01155 | 397 | CDD | Mrs2_Mfm1p-like | 37 | 394 | IPR039204 | - | |
Csa02g01155 | 397 | Coils | Coil | 200 | 227 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g01103 | Csa-Chr2:10764690 | Csa02g01155 | Csa-Chr2:11253390 | 0 | dispersed | |
Csa02g01155 | Csa-Chr2:11253390 | Csa03g02968 | Csa-Chr3:28242018 | 8.37E-115 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g01155 | K16075 | - | csv:101220452 | 731.095 |