Function genes

  The website allows researchers to select Arabidopsis thaliana as a model organism and identify genes related to specific functions in Cucurbitales plants through the best match method. Users can choose functions of interest, such as nitrogen fixation, drought resistance, and cold tolerance, and the webpage will display a list of Cucurbitales plant genes related to the selected function. This facilitates easy access to and understanding of gene information related to specific functions, aiding researchers in studying relevant functions in Cucurbitales plants.

Orthogroup analysis platform
Column 1 Column 2 Column 3 Column 4 Column 5 Column 6 Column 7 Column 8
14-3-3 family Acyl Lipid Metabolism Gene Families AGC Kinase Gene Family Aldehyde Dehydrogenase Gene Family Alfin-like Transcription Factor Family Amino Acid or Auxin Permease AAAP Family Antiporter Super Family Antiporters
AP2-EREBP Transcription Factor Family ARIADNE family ARID Transcription Factor Family AS2 family AT-hook Motif Nuclear Localized (AHL) Family AtRKD Transcription Factor Family B3 DNA Binding Superfamily Basic Helix-Loop-Helix Transcription Factor Gene Family
Basic region leucine zipper (bZIP) Transcription Factor Gene Family BBR or BPC Transcription factor family bZIP Transcription Factor Family BZR Transcription Factor Family C2C2-CO-like Transcription Factor Family C2C2-Dof Transcription Factor Family C2C2-Gata Transcription Factor Family C2C2-YABBY Transcription Factor Family
C2H2 Transcription Factor Family C3H Transcription Factor Family Calmodulin-binding Proteins CAMTA Transcription Factor Family Carbohydrate Esterase CBL-interacting serine-threonine protein kinases CCAAT-DR1 Transcription Factor Family CCAAT-HAP2 Transcription Factor Family
CCAAT-HAP3 Transcription Factor Family CCAAT-HAP5 Transcription Factor Family Cell Wall Biosynthesis Chloroplast and Mitochondria Gene Families COBRA Gene Family Core Cell Cycle Gene Families Core DNA Replication Machinery Family CPP Transcription Factor Family
Cytochrome P450 Cytoplasmic Ribosomal Protein Gene Family Cytoskeleton Gene Families E2F-DP Transcription Factor Family EF-hand Containing Proteins EIL Transcription Factor Family Eukaryotic Initiation Factors Gene Family EXO70 exocyst subunit family
Expansin Gene Family FH2 protein (formin) Gene Family G2-like Transcription Factor Family GeBP Transcription Factor Family Glutamine Dumper (GDU) Family Glutathione S-transferase Gene Family Glycoside Hydrolase Glycosyltransferase
GRAS Transcription Factor Family GRF Transcription Factor Family Histidine Kinase Gene Family Homeobox Transcription Factor Family HRT Transcription Factor Family HSF IDZ Gene Family Inorganic Solute Cotransporters
Ion Channels IQD Protein Family JUMONJI Transcription Factor Family Leucine-rich Repeat extension Gene Families Lipid Metabolism Gene Families LysM Receptor-like Kinase (LYKs) Gene Family LysM Receptor-like Protein (LYPs) Gene Family MADS-box Gene Family
Major Intrinsic Protein MIP MAP Kinase Gene Family MAP Kinase Kinase Gene Family MAP Kinase Kinase Kinase MAP Kinase Kinase Kinase Kinase Mechanosensitive Ion Channel Family Miscellaneous Gene Families MLO family
Monolignol Biosynthesis Gene Families MRS2 Gene Family MYB Transcription Factor Family MYB-Related Transcription Factor Family Myosins gene family NAC Transcription Factor Family NADPH P450 reductases Nicotianamine Synthase Gene Family
NLP Transcription Factor Family Nodulin-like Gene Family Non-SMC Element family Organic Solute Cotransporters Orphan Transcription Factor Family Peroxidase PHD Gene Family PHD Transcription Factor Family
Phospholipase D Gene Family (Wang group) Phytocyanin Superfamily Plant Defensins Gene Families Plant U-box Gene Family Pollen Coat Proteome Polysaccharide Lyase PP2C-type Phosphatase Gene Family Primary Pumps ATPases
Primary Pumps ATPases(2) Protein tyrosine phosphatase (PTP) family PRT Gene Family RAD5 or RAD16-like Gene Family Rapid Response to Elicitors RAV Transcription Factor Family RCI2 Gene Family Receptor kinase-like Gene Family
REM Transcription Factor Family Response Regulator Gene Family SBP-box Gene Family Single Myb Histone (SMH) Gene Family SNARE and Associated Proteins Strubbelig Receptor Gene Family Structural Maintenance of Chromosomes family Su(var)3-9 homologs
Subtilisin-like Serine Gene Family Sucrose Transporter Gene Family Sulfurtransferasese or Rhodanese SUVH1 or 3-interacting DNAJ domain-containing protein superfamily TCP Transcription Factor Family Tify Gene Family Trehalose Biosynthesis Gene Families Trihelix Transcription Factor Family
TRM (TON1 Recruiting Motif) Superfamily TUB Transcription Factor Family Type I MADS-box Gene Family U-box Gene Family VOZ-9 Transcription Factor Family Whirly Transcription Factor Family Wox Gene Family WRKY Transcription Factor Family
Xyloglucan Fucosyltransferase1 ZF-HD Transcription Factor Family Zinc finger-homeobox gene family --- --- --- --- ---

Results

Select Gene s_start s_end Function Ath_gene Identity(%) E-value Score
Car11g00151 74 199 AtRKD Transcription Factor Family AT1G18790 69.7 8.9e-39 157.9
Car10g00181 98 229 AtRKD Transcription Factor Family AT1G18790 64.9 2.0e-38 156.8
Car10g00181 111 280 AtRKD Transcription Factor Family AT1G74480 56.1 2.2e-38 156.8
Cam06g1764 149 263 AtRKD Transcription Factor Family AT1G18790 72.0 3.3e-39 159.1
Cam06g1764 151 259 AtRKD Transcription Factor Family AT1G74480 69.6 4.5e-37 152.1
Cre06g2487 149 267 AtRKD Transcription Factor Family AT1G18790 71.4 2.1e-39 159.8
Cre06g2487 151 263 AtRKD Transcription Factor Family AT1G74480 72.6 5.3e-39 158.7
Vvi17g557 73 209 AtRKD Transcription Factor Family AT1G18790 62.9 1.9e-37 153.3
Vvi17g557 80 242 AtRKD Transcription Factor Family AT1G74480 53.3 2.1e-37 153.3
Vvi4g1190 2 136 AtRKD Transcription Factor Family AT4G35590 69.1 8.1e-43 171.4
Cmu06g1671 149 267 AtRKD Transcription Factor Family AT1G18790 73.1 3.1e-40 162.5
Cmu06g1671 151 263 AtRKD Transcription Factor Family AT1G74480 70.8 3.2e-38 156.0
Lac3g0618 64 247 AtRKD Transcription Factor Family AT1G18790 54.8 8.2e-42 168.3
Tan09g2123 143 277 AtRKD Transcription Factor Family AT1G18790 69.6 4.2e-43 172.6
Tan09g2123 161 305 AtRKD Transcription Factor Family AT1G74480 59.3 1.9e-41 167.2
Cone2ag0843 149 263 AtRKD Transcription Factor Family AT1G18790 73.0 2.1e-39 160.2
Cone2ag0843 152 263 AtRKD Transcription Factor Family AT1G74480 70.5 1.5e-38 157.5
Cone8ag0893 23 197 AtRKD Transcription Factor Family AT4G35590 51.4 2.1e-38 157.1
Cone12ag0864 23 197 AtRKD Transcription Factor Family AT4G35590 50.8 4.6e-38 156.0
Cmetu02g1559 132 265 AtRKD Transcription Factor Family AT1G18790 65.7 3.0e-38 156.0
Blo13g00009 134 296 AtRKD Transcription Factor Family AT1G74480 58.1 2.3e-44 176.4
Bma08g00213 13 152 AtRKD Transcription Factor Family AT1G18790 65.0 6.5e-42 167.9
Bma08g00220 59 198 AtRKD Transcription Factor Family AT1G18790 65.0 6.5e-42 167.9
Bma08g00213 20 178 AtRKD Transcription Factor Family AT1G74480 59.0 2.0e-44 176.4
Bma08g00220 66 224 AtRKD Transcription Factor Family AT1G74480 59.0 2.0e-44 176.4
Bpe12g00547 38 177 AtRKD Transcription Factor Family AT1G18790 62.2 2.6e-40 162.5
Bpe12g00547 22 203 AtRKD Transcription Factor Family AT1G74480 51.7 1.7e-43 173.3
Mch6g0234 105 240 AtRKD Transcription Factor Family AT1G18790 68.4 1.8e-42 169.9
Mch1g1650 3 175 AtRKD Transcription Factor Family AT4G35590 50.3 2.7e-37 152.9
HCH8g1300 73 258 AtRKD Transcription Factor Family AT1G18790 58.8 8.5e-45 177.6
HCH14g0714 20 182 AtRKD Transcription Factor Family AT4G35590 53.4 3.5e-37 152.5
Bhi02g00325 143 268 AtRKD Transcription Factor Family AT1G18790 70.6 1.2e-40 164.5
Cco06g1823 149 267 AtRKD Transcription Factor Family AT1G18790 73.1 3.0e-40 162.5
Cco06g1823 151 263 AtRKD Transcription Factor Family AT1G74480 70.8 3.2e-38 156.0
Bda15g00603 10 149 AtRKD Transcription Factor Family AT1G18790 62.2 4.7e-40 161.8
Bda15g00603 17 175 AtRKD Transcription Factor Family AT1G74480 57.2 1.1e-42 170.6
Sed12g1949 118 256 AtRKD Transcription Factor Family AT1G18790 66.9 4.3e-42 169.5
Sed08g0215 127 254 AtRKD Transcription Factor Family AT1G18790 65.2 3.8e-38 156.4
Sed08g0215 137 287 AtRKD Transcription Factor Family AT1G74480 55.4 1.4e-38 157.9
Sed12g1949 132 245 AtRKD Transcription Factor Family AT1G74480 71.1 3.2e-38 156.8
Cme02g01884 139 265 AtRKD Transcription Factor Family AT1G18790 66.9 7.2e-39 157.9
Cpe04g01500 291 416 AtRKD Transcription Factor Family AT1G18790 69.2 1.4e-39 160.6
Clacu06g1727 143 267 AtRKD Transcription Factor Family AT1G18790 71.2 7.9e-41 164.5
Clacu06g1727 143 263 AtRKD Transcription Factor Family AT1G74480 67.8 1.4e-38 157.1
Cma11g00143 137 262 AtRKD Transcription Factor Family AT1G18790 68.4 3.5e-39 159.5
Cma10g00190 330 463 AtRKD Transcription Factor Family AT1G18790 64.7 2.3e-38 156.8
Cma10g00190 345 513 AtRKD Transcription Factor Family AT1G74480 54.7 5.6e-38 155.6
Cec06g1817 149 267 AtRKD Transcription Factor Family AT1G18790 73.1 3.0e-40 162.5
Cec06g1817 151 263 AtRKD Transcription Factor Family AT1G74480 70.8 3.1e-38 156.0
Cmo11g00166 74 199 AtRKD Transcription Factor Family AT1G18790 69.7 4.6e-39 159.1
Cmo10g00207 327 458 AtRKD Transcription Factor Family AT1G18790 64.9 3.9e-38 156.0
Cmo10g00207 340 509 AtRKD Transcription Factor Family AT1G74480 54.9 1.1e-36 151.4