Function genes

  The website allows researchers to select Arabidopsis thaliana as a model organism and identify genes related to specific functions in Cucurbitales plants through the best match method. Users can choose functions of interest, such as nitrogen fixation, drought resistance, and cold tolerance, and the webpage will display a list of Cucurbitales plant genes related to the selected function. This facilitates easy access to and understanding of gene information related to specific functions, aiding researchers in studying relevant functions in Cucurbitales plants.

Orthogroup analysis platform
Column 1 Column 2 Column 3 Column 4 Column 5 Column 6 Column 7 Column 8
14-3-3 family Acyl Lipid Metabolism Gene Families AGC Kinase Gene Family Aldehyde Dehydrogenase Gene Family Alfin-like Transcription Factor Family Amino Acid or Auxin Permease AAAP Family Antiporter Super Family Antiporters
AP2-EREBP Transcription Factor Family ARIADNE family ARID Transcription Factor Family AS2 family AT-hook Motif Nuclear Localized (AHL) Family AtRKD Transcription Factor Family B3 DNA Binding Superfamily Basic Helix-Loop-Helix Transcription Factor Gene Family
Basic region leucine zipper (bZIP) Transcription Factor Gene Family BBR or BPC Transcription factor family bZIP Transcription Factor Family BZR Transcription Factor Family C2C2-CO-like Transcription Factor Family C2C2-Dof Transcription Factor Family C2C2-Gata Transcription Factor Family C2C2-YABBY Transcription Factor Family
C2H2 Transcription Factor Family C3H Transcription Factor Family Calmodulin-binding Proteins CAMTA Transcription Factor Family Carbohydrate Esterase CBL-interacting serine-threonine protein kinases CCAAT-DR1 Transcription Factor Family CCAAT-HAP2 Transcription Factor Family
CCAAT-HAP3 Transcription Factor Family CCAAT-HAP5 Transcription Factor Family Cell Wall Biosynthesis Chloroplast and Mitochondria Gene Families COBRA Gene Family Core Cell Cycle Gene Families Core DNA Replication Machinery Family CPP Transcription Factor Family
Cytochrome P450 Cytoplasmic Ribosomal Protein Gene Family Cytoskeleton Gene Families E2F-DP Transcription Factor Family EF-hand Containing Proteins EIL Transcription Factor Family Eukaryotic Initiation Factors Gene Family EXO70 exocyst subunit family
Expansin Gene Family FH2 protein (formin) Gene Family G2-like Transcription Factor Family GeBP Transcription Factor Family Glutamine Dumper (GDU) Family Glutathione S-transferase Gene Family Glycoside Hydrolase Glycosyltransferase
GRAS Transcription Factor Family GRF Transcription Factor Family Histidine Kinase Gene Family Homeobox Transcription Factor Family HRT Transcription Factor Family HSF IDZ Gene Family Inorganic Solute Cotransporters
Ion Channels IQD Protein Family JUMONJI Transcription Factor Family Leucine-rich Repeat extension Gene Families Lipid Metabolism Gene Families LysM Receptor-like Kinase (LYKs) Gene Family LysM Receptor-like Protein (LYPs) Gene Family MADS-box Gene Family
Major Intrinsic Protein MIP MAP Kinase Gene Family MAP Kinase Kinase Gene Family MAP Kinase Kinase Kinase MAP Kinase Kinase Kinase Kinase Mechanosensitive Ion Channel Family Miscellaneous Gene Families MLO family
Monolignol Biosynthesis Gene Families MRS2 Gene Family MYB Transcription Factor Family MYB-Related Transcription Factor Family Myosins gene family NAC Transcription Factor Family NADPH P450 reductases Nicotianamine Synthase Gene Family
NLP Transcription Factor Family Nodulin-like Gene Family Non-SMC Element family Organic Solute Cotransporters Orphan Transcription Factor Family Peroxidase PHD Gene Family PHD Transcription Factor Family
Phospholipase D Gene Family (Wang group) Phytocyanin Superfamily Plant Defensins Gene Families Plant U-box Gene Family Pollen Coat Proteome Polysaccharide Lyase PP2C-type Phosphatase Gene Family Primary Pumps ATPases
Primary Pumps ATPases(2) Protein tyrosine phosphatase (PTP) family PRT Gene Family RAD5 or RAD16-like Gene Family Rapid Response to Elicitors RAV Transcription Factor Family RCI2 Gene Family Receptor kinase-like Gene Family
REM Transcription Factor Family Response Regulator Gene Family SBP-box Gene Family Single Myb Histone (SMH) Gene Family SNARE and Associated Proteins Strubbelig Receptor Gene Family Structural Maintenance of Chromosomes family Su(var)3-9 homologs
Subtilisin-like Serine Gene Family Sucrose Transporter Gene Family Sulfurtransferasese or Rhodanese SUVH1 or 3-interacting DNAJ domain-containing protein superfamily TCP Transcription Factor Family Tify Gene Family Trehalose Biosynthesis Gene Families Trihelix Transcription Factor Family
TRM (TON1 Recruiting Motif) Superfamily TUB Transcription Factor Family Type I MADS-box Gene Family U-box Gene Family VOZ-9 Transcription Factor Family Whirly Transcription Factor Family Wox Gene Family WRKY Transcription Factor Family
Xyloglucan Fucosyltransferase1 ZF-HD Transcription Factor Family Zinc finger-homeobox gene family --- --- --- --- ---

Results

Select Gene s_start s_end Function Ath_gene Identity(%) E-value Score
Lcy2g1159 66 399 Non-SMC Element family AT1G51130 56.6 1.4e-95 347.4
Lcy2g1159 66 379 Non-SMC Element family AT3G20760 51.2 2.6e-80 296.6
Car11g00707 55 402 Non-SMC Element family AT1G51130 57.6 1.1e-104 377.5
Car10g00863 18 202 Non-SMC Element family AT1G51130 60.1 3.6e-52 203.0
Car11g00707 52 382 Non-SMC Element family AT3G20760 53.0 2.1e-89 326.6
Car10g00863 18 183 Non-SMC Element family AT3G20760 55.4 1.4e-42 171.0
Cam03g1398 31 406 Non-SMC Element family AT1G51130 53.3 1.6e-98 356.7
Cam03g1398 58 386 Non-SMC Element family AT3G20760 52.6 1.4e-88 323.6
Cre03g1651 31 406 Non-SMC Element family AT1G51130 53.5 8.0e-99 357.8
Cre03g1651 58 386 Non-SMC Element family AT3G20760 52.9 7.2e-89 324.7
Vvi8g1257 100 438 Non-SMC Element family AT1G51130 58.6 5.9e-107 384.8
Vvi6g128 30 393 Non-SMC Element family AT1G51130 51.1 1.8e-95 346.7
Vvi8g1257 100 429 Non-SMC Element family AT3G20760 55.4 5.4e-94 341.7
Cmu03g1978 31 406 Non-SMC Element family AT1G51130 53.5 1.5e-99 360.1
Cmu03g1978 58 386 Non-SMC Element family AT3G20760 52.9 1.3e-89 327.0
Lac3g1293 66 399 Non-SMC Element family AT1G51130 56.3 5.6e-95 345.5
Lac3g1293 66 333 Non-SMC Element family AT3G20760 55.5 6.3e-80 295.4
Tan09g0895 28 402 Non-SMC Element family AT1G51130 56.3 4.4e-105 379.0
Tan09g0895 51 382 Non-SMC Element family AT3G20760 51.9 1.4e-87 320.9
Cla03g01320 31 406 Non-SMC Element family AT1G51130 53.5 1.5e-99 360.1
Cla03g01320 58 386 Non-SMC Element family AT3G20760 52.9 1.4e-89 327.0
Hepe09g1066 66 402 Non-SMC Element family AT1G51130 54.0 2.4e-92 336.3
Hepe09g1066 66 382 Non-SMC Element family AT3G20760 52.5 3.6e-82 302.4
Cone18ag0124 45 409 Non-SMC Element family AT1G51130 54.5 6.1e-104 375.2
Cone11ag1467 1 404 Non-SMC Element family AT1G51130 50.2 1.1e-97 354.4
Cone18ag0124 54 393 Non-SMC Element family AT3G20760 50.3 1.5e-88 323.9
Lsi06g00472 57 405 Non-SMC Element family AT1G51130 56.1 1.2e-98 357.1
Lsi06g00472 57 385 Non-SMC Element family AT3G20760 52.9 1.3e-89 327.0
Cmetu02g0721 62 407 Non-SMC Element family AT1G51130 56.0 9.6e-97 350.9
Cmetu02g0721 62 387 Non-SMC Element family AT3G20760 53.0 7.7e-88 321.2
Bpe08g01238 45 394 Non-SMC Element family AT1G51130 52.7 1.1e-95 347.1
Mch6g1103 55 403 Non-SMC Element family AT1G51130 57.7 8.6e-102 367.5
Mch6g1103 50 383 Non-SMC Element family AT3G20760 51.8 5.2e-88 321.6
HCH8g0485 44 395 Non-SMC Element family AT1G51130 53.4 1.3e-94 343.6
Bhi02g01603 60 407 Non-SMC Element family AT1G51130 55.4 3.7e-97 352.8
Bhi02g01604 60 407 Non-SMC Element family AT1G51130 55.4 3.7e-97 352.8
Bhi02g01603 60 387 Non-SMC Element family AT3G20760 52.7 1.3e-88 324.3
Bhi02g01604 60 387 Non-SMC Element family AT3G20760 52.7 1.3e-88 324.3
Cco03g1418 31 406 Non-SMC Element family AT1G51130 53.3 8.2e-98 354.4
Cco03g1418 58 386 Non-SMC Element family AT3G20760 52.9 6.6e-89 324.7
Sed12g1604 4 401 Non-SMC Element family AT1G51130 52.5 8.0e-101 365.2
Sed08g1044 65 295 Non-SMC Element family AT1G51130 59.9 2.6e-67 253.8
Sed08g1045 65 295 Non-SMC Element family AT1G51130 59.9 2.6e-67 253.8
Sed12g1604 55 381 Non-SMC Element family AT3G20760 51.5 1.5e-85 314.3
Sed08g1044 65 296 Non-SMC Element family AT3G20760 54.0 4.1e-62 236.5
Sed08g1045 65 296 Non-SMC Element family AT3G20760 54.0 4.1e-62 236.5
Cme02g00472 58 406 Non-SMC Element family AT1G51130 56.1 2.7e-98 355.9
Cme02g00472 58 386 Non-SMC Element family AT3G20760 53.5 1.3e-89 327.0
Csa01g03120 62 329 Non-SMC Element family AT1G51130 57.2 1.1e-80 297.4
Csa01g03120 62 328 Non-SMC Element family AT3G20760 55.4 2.8e-81 299.3
Cpe04g00939 55 377 Non-SMC Element family AT1G51130 52.4 5.1e-91 332.0
Clacu03g1417 31 406 Non-SMC Element family AT1G51130 53.5 1.5e-99 360.1
Clacu03g1417 58 386 Non-SMC Element family AT3G20760 52.9 1.3e-89 327.0
Chy02g01406 58 409 Non-SMC Element family AT1G51130 55.1 1.6e-95 346.7
Chy02g01406 58 386 Non-SMC Element family AT3G20760 52.6 2.8e-89 325.9
Cma11g00828 55 403 Non-SMC Element family AT1G51130 57.2 2.7e-104 376.3
Cma10g00964 29 404 Non-SMC Element family AT1G51130 53.3 5.5e-97 352.1
Cma11g00828 52 387 Non-SMC Element family AT3G20760 52.2 8.1e-90 328.2
Cma10g00964 51 384 Non-SMC Element family AT3G20760 50.9 8.3e-87 318.2
Cec03g1430 31 406 Non-SMC Element family AT1G51130 53.3 4.7e-98 355.1
Cec03g1430 58 386 Non-SMC Element family AT3G20760 52.3 1.2e-87 320.5
Cmo11g00835 55 434 Non-SMC Element family AT1G51130 51.2 5.8e-94 342.0