Function genes

  The website allows researchers to select Arabidopsis thaliana as a model organism and identify genes related to specific functions in Cucurbitales plants through the best match method. Users can choose functions of interest, such as nitrogen fixation, drought resistance, and cold tolerance, and the webpage will display a list of Cucurbitales plant genes related to the selected function. This facilitates easy access to and understanding of gene information related to specific functions, aiding researchers in studying relevant functions in Cucurbitales plants.

Orthogroup analysis platform
Column 1 Column 2 Column 3 Column 4 Column 5 Column 6 Column 7 Column 8
14-3-3 family Acyl Lipid Metabolism Gene Families AGC Kinase Gene Family Aldehyde Dehydrogenase Gene Family Alfin-like Transcription Factor Family Amino Acid or Auxin Permease AAAP Family Antiporter Super Family Antiporters
AP2-EREBP Transcription Factor Family ARIADNE family ARID Transcription Factor Family AS2 family AT-hook Motif Nuclear Localized (AHL) Family AtRKD Transcription Factor Family B3 DNA Binding Superfamily Basic Helix-Loop-Helix Transcription Factor Gene Family
Basic region leucine zipper (bZIP) Transcription Factor Gene Family BBR or BPC Transcription factor family bZIP Transcription Factor Family BZR Transcription Factor Family C2C2-CO-like Transcription Factor Family C2C2-Dof Transcription Factor Family C2C2-Gata Transcription Factor Family C2C2-YABBY Transcription Factor Family
C2H2 Transcription Factor Family C3H Transcription Factor Family Calmodulin-binding Proteins CAMTA Transcription Factor Family Carbohydrate Esterase CBL-interacting serine-threonine protein kinases CCAAT-DR1 Transcription Factor Family CCAAT-HAP2 Transcription Factor Family
CCAAT-HAP3 Transcription Factor Family CCAAT-HAP5 Transcription Factor Family Cell Wall Biosynthesis Chloroplast and Mitochondria Gene Families COBRA Gene Family Core Cell Cycle Gene Families Core DNA Replication Machinery Family CPP Transcription Factor Family
Cytochrome P450 Cytoplasmic Ribosomal Protein Gene Family Cytoskeleton Gene Families E2F-DP Transcription Factor Family EF-hand Containing Proteins EIL Transcription Factor Family Eukaryotic Initiation Factors Gene Family EXO70 exocyst subunit family
Expansin Gene Family FH2 protein (formin) Gene Family G2-like Transcription Factor Family GeBP Transcription Factor Family Glutamine Dumper (GDU) Family Glutathione S-transferase Gene Family Glycoside Hydrolase Glycosyltransferase
GRAS Transcription Factor Family GRF Transcription Factor Family Histidine Kinase Gene Family Homeobox Transcription Factor Family HRT Transcription Factor Family HSF IDZ Gene Family Inorganic Solute Cotransporters
Ion Channels IQD Protein Family JUMONJI Transcription Factor Family Leucine-rich Repeat extension Gene Families Lipid Metabolism Gene Families LysM Receptor-like Kinase (LYKs) Gene Family LysM Receptor-like Protein (LYPs) Gene Family MADS-box Gene Family
Major Intrinsic Protein MIP MAP Kinase Gene Family MAP Kinase Kinase Gene Family MAP Kinase Kinase Kinase MAP Kinase Kinase Kinase Kinase Mechanosensitive Ion Channel Family Miscellaneous Gene Families MLO family
Monolignol Biosynthesis Gene Families MRS2 Gene Family MYB Transcription Factor Family MYB-Related Transcription Factor Family Myosins gene family NAC Transcription Factor Family NADPH P450 reductases Nicotianamine Synthase Gene Family
NLP Transcription Factor Family Nodulin-like Gene Family Non-SMC Element family Organic Solute Cotransporters Orphan Transcription Factor Family Peroxidase PHD Gene Family PHD Transcription Factor Family
Phospholipase D Gene Family (Wang group) Phytocyanin Superfamily Plant Defensins Gene Families Plant U-box Gene Family Pollen Coat Proteome Polysaccharide Lyase PP2C-type Phosphatase Gene Family Primary Pumps ATPases
Primary Pumps ATPases(2) Protein tyrosine phosphatase (PTP) family PRT Gene Family RAD5 or RAD16-like Gene Family Rapid Response to Elicitors RAV Transcription Factor Family RCI2 Gene Family Receptor kinase-like Gene Family
REM Transcription Factor Family Response Regulator Gene Family SBP-box Gene Family Single Myb Histone (SMH) Gene Family SNARE and Associated Proteins Strubbelig Receptor Gene Family Structural Maintenance of Chromosomes family Su(var)3-9 homologs
Subtilisin-like Serine Gene Family Sucrose Transporter Gene Family Sulfurtransferasese or Rhodanese SUVH1 or 3-interacting DNAJ domain-containing protein superfamily TCP Transcription Factor Family Tify Gene Family Trehalose Biosynthesis Gene Families Trihelix Transcription Factor Family
TRM (TON1 Recruiting Motif) Superfamily TUB Transcription Factor Family Type I MADS-box Gene Family U-box Gene Family VOZ-9 Transcription Factor Family Whirly Transcription Factor Family Wox Gene Family WRKY Transcription Factor Family
Xyloglucan Fucosyltransferase1 ZF-HD Transcription Factor Family Zinc finger-homeobox gene family --- --- --- --- ---

Results

Select Gene s_start s_end Function Ath_gene Identity(%) E-value Score
Lcy4g1646 43 505 PHD Gene Family AT4G30200 54.8 2.3e-134 476.9
Car11g00358 5 471 PHD Gene Family AT4G30200 53.8 1.5e-134 477.2
Car10g00371 5 473 PHD Gene Family AT4G30200 53.2 2.9e-133 473.0
Car05g00633 4 468 PHD Gene Family AT4G30200 54.2 2.1e-131 466.8
Cam11g1238 25 492 PHD Gene Family AT4G30200 53.0 8.0e-129 458.0
Cre11g1642 25 492 PHD Gene Family AT4G30200 53.6 9.4e-131 464.5
Cmu11g1222 25 492 PHD Gene Family AT4G30200 53.2 1.3e-129 460.7
Lac6g2320 4 471 PHD Gene Family AT4G30200 54.4 1.9e-134 477.2
Tan08g0848 4 456 PHD Gene Family AT4G30200 53.8 1.8e-126 450.7
Cla11g01180 16 478 PHD Gene Family AT4G30200 52.9 1.2e-127 454.1
Hepe08g2123 6 472 PHD Gene Family AT4G30200 52.9 3.2e-128 456.1
Cone16ag0292 4 474 PHD Gene Family AT4G30200 51.2 2.1e-127 453.8
Cone2ag0714 4 472 PHD Gene Family AT4G30200 51.6 1.4e-126 451.1
Lsi11g00762 25 487 PHD Gene Family AT4G30200 52.9 3.0e-128 456.1
Cmetu05g1099 4 491 PHD Gene Family AT4G30200 51.5 6.2e-127 451.8
Blo01g00674 25 463 PHD Gene Family AT4G30200 52.1 3.7e-121 432.6
Bma01g00377 11 454 PHD Gene Family AT4G30200 51.8 2.1e-123 439.9
Bpe02g02083 1 440 PHD Gene Family AT4G30200 52.3 6.4e-122 434.9
Bhi06g01253 4 471 PHD Gene Family AT4G30200 53.0 9.6e-129 458.4
Bhi02g00749 2 456 PHD Gene Family AT4G30200 53.3 2.8e-128 456.8
Bhi02g00750 2 456 PHD Gene Family AT4G30200 53.3 2.8e-128 456.8
Bhi06g01254 1 450 PHD Gene Family AT4G30200 52.7 4.6e-123 439.5
Cco11g1245 25 492 PHD Gene Family AT4G30200 53.4 7.3e-130 461.5
Bda01g01916 1 440 PHD Gene Family AT4G30200 52.3 4.7e-123 438.7
Sed03g2828 4 471 PHD Gene Family AT4G30200 51.5 4.6e-124 443.0
Sed03g2829 4 471 PHD Gene Family AT4G30200 51.5 4.6e-124 443.0
Cme02g01578 4 464 PHD Gene Family AT4G30200 52.1 2.7e-129 459.5
Cme05g01358 22 496 PHD Gene Family AT4G30200 50.1 2.7e-121 433.0
Csa02g00638 4 490 PHD Gene Family AT4G30200 50.9 1.0e-125 447.6
Cpe11g00638 1 447 PHD Gene Family AT4G30200 53.8 2.2e-125 446.8
Clacu11g1397 25 492 PHD Gene Family AT4G30200 53.2 1.2e-129 460.7
Chy05g00899 4 471 PHD Gene Family AT4G30200 51.8 7.9e-126 448.0
Cma11g00387 101 573 PHD Gene Family AT4G30200 53.3 7.1e-136 481.9
Cma05g00690 4 468 PHD Gene Family AT4G30200 53.6 2.6e-130 463.4
Cec11g1250 25 491 PHD Gene Family AT4G30200 53.1 3.6e-129 459.1
Cmo10g00421 5 473 PHD Gene Family AT4G30200 53.2 3.3e-133 473.0
Cmo05g00725 16 475 PHD Gene Family AT4G30200 53.8 5.0e-129 459.1