Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00005 ATGGCTCAGTTACCGCCAAAAGTCCCAAACATGGCGGGGAATTGGCCGGAATTTTCTAACCAGAAGATATCTACAGTGGTGGGCCGAGGAGGCTTTCCACCAAATGCAGCCGCTCACAACCCTTCGTGGGTGGATGAATTCCTAGACTTCTCTTCATCCAGACGTGGGTCTCACCGGCGGTCGGTTAGTGATTCCATCGCATTCCTCGAAATGCCCATGCTGGACGAATGCCGTGGCTCGGCGACGAACCACGACGCTGGAGCGAACAACGAGTTCGATAGATTTGATGACGACCAATTCATGTCCATGTTCACTGACGAAATCTCATCAGCAGTGGGACCCACCGTGTCCTCCTCGAATCCTTCCACGCCTTCCGATCATAATAGCATTGATGATGAGAAGGAAGCGCTACATAATACCGATCAGAAGCACCACAAAAATGAATCTGACGAGGTCCAAAGCCATTGCAAGCCGGAAAACCAAGCTCCATACAGTGCAGCTGCCAACGACGCCGGTGATAGGATAACCGACCCCAAAAGGGTCAAAAGAATCTTGGCGAATAGGCAGTCTGCACAAAGATCGAGGGTCAGGAAACTGCAATACATATCAGAGTTGGAACGAAGTGTCACTTCTCTACAAGCTGAAGTTTCTGTATTATCGCCACGGGTGGCGTTTCTCGACCACCAAAGGTTGCTCCTAAACGTAGATAACAGTGCTCTCAAACAAAGGATCGCAGCTCTCGCCCAAGATAAGATTTTTAAAGATGGCAAGTCTGTTTTTGTTTTTTCTCATCAAGAAGCACTGAAGAGAGAAATCGAAAGACTGAGGCAAGTGTATCACCAGCAGAATCTAAAGAAGATCCACAATATCGAGCATTCACCTCCTTGTTCTGATTCCAAATCTGCAGCTGATAAAAAAGAAAACCTTCTTAACGTTTGA 939 47.71 MAQLPPKVPNMAGNWPEFSNQKISTVVGRGGFPPNAAAHNPSWVDEFLDFSSSRRGSHRRSVSDSIAFLEMPMLDECRGSATNHDAGANNEFDRFDDDQFMSMFTDEISSAVGPTVSSSNPSTPSDHNSIDDEKEALHNTDQKHHKNESDEVQSHCKPENQAPYSAAANDAGDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDGKSVFVFSHQEALKREIERLRQVYHQQNLKKIHNIEHSPPCSDSKSAADKKENLLNV 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 289789 291664 - Bda001660.1 Bda01g00005 5
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00005 312 MobiDBLite consensus disorder prediction 138 155 - -
Bda01g00005 312 MobiDBLite consensus disorder prediction 111 131 - -
Bda01g00005 312 PANTHER BASIC LEUCINE ZIPPER 34 1 304 - -
Bda01g00005 312 Gene3D - 178 252 - -
Bda01g00005 312 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Bda01g00005 312 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 229 IPR004827 GO:0003700|GO:0006355
Bda01g00005 312 PANTHER BASIC LEUCINE ZIPPER 61-LIKE 1 304 - -
Bda01g00005 312 SUPERFAMILY Leucine zipper domain 179 233 IPR046347 GO:0003700|GO:0006355
Bda01g00005 312 SMART brlzneu 175 239 IPR004827 GO:0003700|GO:0006355
Bda01g00005 312 Coils Coil 265 285 - -
Bda01g00005 312 MobiDBLite consensus disorder prediction 290 312 - -
Bda01g00005 312 MobiDBLite consensus disorder prediction 138 157 - -
Bda01g00005 312 Pfam bZIP transcription factor 179 222 IPR004827 GO:0003700|GO:0006355
Bda01g00005 312 MobiDBLite consensus disorder prediction 111 126 - -
Bda01g00005 312 CDD bZIP_plant_RF2 180 230 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00005 Bda-Chr1:289789 Bda15g00966 Bda-Chr15:17824285 0 dispersed
Bda01g00005 Bda-Chr1:289789 Bda14g00696 Bda-Chr14:5176848 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15322 PF00170 bZIP_1 3.20E-09 CL0018 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00005 - - qsu:112040072 415.616