Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00048 ATGGCATCCCAAAATGTTCCCAGAGCTGTGTTGAAGCAGCCTAATAAAATTGTTGGTGTTTCGACAGCTGAGACTGATGACATGAAACCTTTCCCTCGGCAGACAAAGATAAACGAACCTGATTCAATTGGTCTTGACCAGCCATCAAAATTGGTACAAGGAAACTCAAAACCAGTTATGGTGGAATCTTCTGATAAGGTACCTGATAAATTAAGCTCAATCTCATCTCCATCTGACCTCGAAGAAACATCGGCAGTACTAGATTATTCTCTCTCTTTGGAAAGCTCTATTGATCAAGAAAAGAAAACATCTGGGTACGGAAGTGTGAAGAACAGTTTTGTGTCAGCCAAAGTTAGTGATGGAACAAACAGTCTAGGGAAGACTAGTGGAAGTGCAAAGATTAGTGATCGTGTTGAATTTGTGGAGAGTGGGAAGAGCAGTATGTGTAGAGCAAGCACAAGCAGTGATATCAGTGATGAAAGCAGTTGTAGCAGCTTCAGCAGTGGCATCAACAAGCCTCACAAAGCAAATGACATGAGGTGGGAGGCAATACAAGCAGTCAGAGCTAGAGACGGGCTATTGGGATTAGGCCATTTTAGGCTCTTGAAGAGGCTGGGTTGTGGTGATATTGGGAGCGTCTATTTGTCAGAATTGAGTGGTACCAAATGTTATTTTGCTATGAAAGTAATGGACAAAGGGTCTCTTGCTAGTCGGAAGAAGCTGCTTCGTGCCCAAACGGAAAGAGATATATTGCAGTCCTTGGATCATCCTTTCCTCCCTACATTGTATACCCACTTTGAAACAGATAAATTTTCATGCTTAGTGATGGAGTTTTGCCCTGGGGGAGATTTGCACTCTCTAAGGCAGAGGCAGCCAGGAAAGCATTTTGCTGAACAGGCGGTGAAATTTTATGTAGCAGAGGTCCTCCTTGCAATGGAATACCTTCACATGCTTGGAATTGTGTACCGTGACCTGAAGCCAGAAAATGTTCTTGTAAGAGAAGATGGCCACATAATGCTCTCCGACTTTGATCTTTCCCTCCGTTGTGCTGTCAGTCCAACTCTGGTGAAGAGCTCGGCAACCGATTCAGAAACTTTACGAAAAAATCCAGTTTATTGTGTCCAACCTGCTTGCATTGAGCCTTCCTGCATCCATCCATCTTGTGTAGCTCCAACTACTTGCTTCTCCCCCCGCCTCTTTTCCAGTAAGTCGAAGAAAGATCGGAAGAACAAGATCGAGATCGGAAACCAGGTCAGCCCCTTGCCGGAGCTGATTGCCGAGCCAACCGATGCTCGTTCTATGTCATTTGTTGGGACCCACGAGTACTTGGCTCCTGAGATAATCAAAGGCGAAGGCCACGGAAGTGCTGTTGATTGGTGGACATTCGGAATCTTTTTATACGAGCTCTTGTTTGGAAAAACTCCGTTTAAAGGATCGGGAAATCGAGCCACATTGTTTAACGTAGTGGGTCAGCCACTCAGGTTTCCGGAGTCGCCAGTGGTGAGTTTTGGAGCTAGGGATTTGATCAGGGGATTGCTTGTTAAAGAACCTCAGCAGAGATTGGCTTATAAAAGAGGGGCAACTGAGATTAAGCAGCATCCATTTTTTGAAGGTGTGAATTGGGCGTTGATTCGATGTGCCACCCCGCCGGAGATTCCGAAGCCGATCGAAATAGAGCGGATTCCGGCACCGGCAGCTTCTACTAGTGAAAAGGCCCCTCCTGCTTCTAATAAGAAAGGTTTTGAGAATTATCTGGAGTTTGATTTCTTTTAG 1773 45.29 MASQNVPRAVLKQPNKIVGVSTAETDDMKPFPRQTKINEPDSIGLDQPSKLVQGNSKPVMVESSDKVPDKLSSISSPSDLEETSAVLDYSLSLESSIDQEKKTSGYGSVKNSFVSAKVSDGTNSLGKTSGSAKISDRVEFVESGKSSMCRASTSSDISDESSCSSFSSGINKPHKANDMRWEAIQAVRARDGLLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTERDILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHSLRQRQPGKHFAEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSATDSETLRKNPVYCVQPACIEPSCIHPSCVAPTTCFSPRLFSSKSKKDRKNKIEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFGARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPIEIERIPAPAASTSEKAPPASNKKGFENYLEFDFF 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6834613 6836813 + Bda001769.1 Bda01g00048 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00048 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Bda01g00048 590 Gene3D Transferase(Phosphotransferase) domain 1 430 554 - -
Bda01g00048 590 SUPERFAMILY Protein kinase-like (PK-like) 178 561 IPR011009 -
Bda01g00048 590 SMART serkin_6 199 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00048 590 Gene3D Phosphorylase Kinase; domain 1 197 282 - -
Bda01g00048 590 Gene3D Transferase(Phosphotransferase) domain 1 283 351 - -
Bda01g00048 590 Pfam Protein kinase domain 433 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00048 590 Pfam Protein kinase domain 200 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00048 590 ProSiteProfiles Protein kinase domain profile. 199 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00048 590 MobiDBLite consensus disorder prediction 1 79 - -
Bda01g00048 590 CDD STKc_phototropin_like 198 559 - -
Bda01g00048 590 PANTHER FLIPPASE KINASE 1-RELATED 63 590 - -
Bda01g00048 590 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 63 590 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00048 Bda-Chr1:6834613 Bda07g00847 Bda-Chr7:9920701 0 dispersed
Bda01g01294 Bda-Chr1:48416010 Bda01g00048 Bda-Chr1:6834613 9.54E-79 dispersed
Bda09g01417 Bda-Chr9:46014998 Bda01g00048 Bda-Chr1:6834613 8.93E-179 dispersed
Bda14g00484 Bda-Chr14:3481825 Bda01g00048 Bda-Chr1:6834613 0 dispersed
Bda01g00048 Bda-Chr1:6834613 Bda05g00678 Bda-Chr5:55076302 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69409 PF00069 Pkinase 2.00E-36 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00048 K08286 - mnt:21400916 914.064