Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00066 ATGACTTCTGGTCAGCCTTTGCTGGCTTCATCAGAGTCTTCACCAGTGGTGCAAAATAATCCCTTGACTCAAAATTTTGGCTCCTTTAGTTGTCACAGCCGCAATGGTTCTTTCTCATGGTTTAATGACGCAAAAAATGATTTGATTGACGAGAAGGAAGATCACGTTATCTCTCTTGGAGATAGTTGTTTGTCAGAGAATCACCTTAAATGTTCTGCTTCTCTTTCCGAAAAGAGGCGGTGTTGTTCAGTGGTCTCTAGGTTTTCTCAGCAGTTTCCATTTGAGTACCCCACACAGGAAGGGAAACTCCTGGTATCGTGGGGTACAATGGATTTGCGCAGTATTAACAGCAATTCAACGAGCTTTGAACTTTCTAGCATGCAAGAAAAGTTGAGCAAGTCTCACAGAATTTACCATAAGAGTGGTCAGTTTGAAGATAATTTATATCATGAGGAGAATCCAAGGCTAATTTATATCAGTGATCCCAGGAGAACAAATGACAAATATGAGTTCACAGGCAATGAGATCAGAACTAGCAAGTACACTCTTATGACATTCTTGCCAAAGAATCTCTTTATTCAATTCCATCGGCTTGCTTACCTATACTTCCTAGCAATTGCTGCTCTTAACCAGCTTCCACCACTTGCGGTCTTTGGGAGAACAGTCTCTCTTTTCCCCCTCTTATTTGTTCTTTGTGTCACATCCATAAAAGATGGCTATGAAGATTGGCGAAGGCATCGGTCAGATCGAAAAGAGAATAACCGTGAGGCTCTAGTACTTCAATCTGGTGAATTTCAATTGAAAAAGTGGGAAAAAATACGAGCCGGCGAGGTTGTTAAAATTCGTGTTGGTGAAACCATTCCTTGTGATATTGTCTTGTTAGGGACAAGTGACCCTAGTGGACTTGCATACATTCAGACAATGAATTTGGATGGTGAATCAAATTTGAAGACGAGGTATGCTCGGCAGGAAACAGCATTGGCAATTGCTGAGGGATGTTCTATTTCTGGACTTCTCAGATGTGAACAACCGAACAGGAATATTTATGAGTTCACTGCCAACATGGAATTCAAAGGTCATAAATTTCCCCTCAACCAATCAAACATAGTTTTGCGTGGTTGCCAGCTCAAGAACACTGAATGGATAATAGGAGTTGTTGTCTATGCTGGACAGGAAACAAAAGCAATGTTGAACAGTGCAGTTTCACCATCCAAAAGAAGCAAACTAGAGGGTTACATGAACCGAGAAACATTGTGGTTGTCCATCTTCCTTTTTGTCATGTGTTTGGTAGTTTCCATTGGAATGGGCTTATGGCTTTTCCGCCACAACAACCGGCTTGACACCTTGCCATATTACAGAAAAATATATTTCTCAACTGGGAATGAAAACGGTAAGACATACAAGTATTACGGTATACCTAGAGAAATCTTTTTCTCCTTTCTGAGTTCTATCATAGTATTTCAGATAATGATACCAATCTCTCTTTATATTACGATGGAGTTGGTTAGATTGGGTCAGTCATATTTTATGATTGAAGACAAGGATATGTATGATAGTAGCTCTGGCTCGAGGTTTCAGTGCAGGTCACTAAATATTAATGAAGATCTTGGTCAGATACGCTACGTGTTTTCAGATAAAACAGGAACACTTACAGAAAACAAAATGGAATTCCGAAGGGCGAGTGTATATGGGAAGGATTTTGGAAACTCTTTGATTGTAGCTGATCCATCAAAGTTGGATGATATTTCAGCATCACTTGGTAAAAAAAGATGGAAGCTAAAATATGATGTTCCTGTTGACTTGGAGCTCCTTAAGCTGTTGCACATAGACATAACTGGAGCTGCAAAGAGAGCTGCACAGGAGTTTTTCCTTACATTGGCTGCATGTAATACCGTAATACCCATTATCACTGATTATCAGTGTTCTGATGCAAACAATGGATCCCAAGAAGATGCAGAATGCATTGATTATCAGGGGGAATCTCCTGATGAGCAGGCATTAGTTATTGCAGCTTCAGCTTACGGATATACTCTTTTTGAGAGAACCTCTGGGCATATTGGTATTGACATCAATGGTGTGAAACAAAGCAGGTTTGATGTTTTGGGCTTGCATGAGTTTGATAGTGTGCGCAAAAGAATGTCTGTTGTAATCAGATATCCTGACAATATTGTAAAGGTTCTCGTGAAAGGTGCTGATACAACAATGCTTAGCATTTTAGCAAATGACTCTGAGATAAGTGATGATGTAAGGAGTGGAACTCAAAAGGATTTAAATTGCTATTCATCACAAGGTTTACGCACGCTTATAGTAGCCTGTAGGGATCTGACAGATGCTGAACTAGAGCAGTGGCAATGTTTGTATGAAGATGCAAGCACTTCTTTGACTGATAGGGCCCTTAAATTACGTCAGACCGCTGCTATTATAGAATGCGACTTAAAACTTCTTGGTGCAACTGCTATTGAGGACAAGCTACAAGATGGTGTGCCTGAAGCTATCGAATCCCTCAGGCAAGCTGGAATAAAGGTCTGGGTTCTCACTGGAGATAAGCAGGAGACTGCTATATCCATTGGTCTCTCGTGCAAACTCCTAACTGCAGATATGCAGCGGATAATAATAAATGGAACTTCAGAAAATGATTGCAGAATTCTTTTGACTCAAGCTATGGAAAAATGTGGTCTTAAATCATTGGACAGATCAAAGCAGAATTTAAAATGGAGAACAAATTCTGAAAATGACTATTCTCAGGCTCTTGGAATCGCCAAGTCAGCTGCTGTAGCGCAATGTTGTACAATGAAAGAAGAAGGAATGCTTTTTGACCTGGCAACTTCATGCAGAGTTGTGCTCTGCTGTCGTGTTGCACCGCTACAGAAAGCTGGCATTGTTGATTTAATTAAGAGTCGGACAGATGATATGACTCTTGCAATAGGCGATGGGGCTAATGACGTGTCAATGATCCAAATGGCTGATGTTGGTGTTGGCATATGTGGTCAAGAAGGGCGACAAGCAGTAATGGCATCTGATTTCGCTATGGGACAGTTCCGTTTTCTTAAAAGATTACTTTTAGTGCATGGACACTGGAATTATCAACGTATTGGTTACATGATTCTATACAATTTCTACAGAAATGCTGTTTTCGTGCTGATGCTTTTTTGGTACATACTATGCACAGCTTTCTCAACTACTTCGGCATTAACGGATTGGAGTAGTGTATTTTATTCAGTTATTTATACATCTATCCCCACTATTTTTGTTGGTATCCTGGACAAAAATTTAAGTCACAAGACATTATTAAAATATCCGAAGCTATATTGTGCAGGCCATAGACAGGAGGCTTATAATTTACATCTCTTCTGGATCACAATGATTGACACACTATGGCAGAGCCTTGTGCTTTTCTATATACCTTTATTCACTTATAAGGAAAGCTCCATAGATATATGGAGCATGGGCAGTTTGTGGACTATAGCAGTTGTTGTCCTCGTAAATGTACACTTGGCGATGGACGTACACCGATGGGTTTTGATCACTCATATAGCAGTATGGGGATCCATAGTCATTACGTATGCCTGCATGGTGGTTTTGGATTCAATACCTATATTTCCCAATTACTGGACAATCTTCAATTTGGCCAAGTCTCCTACCTATTGGCTCACTATTTTTCTTATAATAGTGGTAGCATTGCTTCCTCGCTTTACTGTCAAAATTGTGCATCAAAGTTTTTGGCCTTCGGACATCCAAATAGCTAGGGAAGCTGAGATTCTTAAGAAAGGGAGAGATTGCCTGGGTTCAAAACGAGATCAAAGTCCCAGCTGA 3813 40.2 MTSGQPLLASSESSPVVQNNPLTQNFGSFSCHSRNGSFSWFNDAKNDLIDEKEDHVISLGDSCLSENHLKCSASLSEKRRCCSVVSRFSQQFPFEYPTQEGKLLVSWGTMDLRSINSNSTSFELSSMQEKLSKSHRIYHKSGQFEDNLYHEENPRLIYISDPRRTNDKYEFTGNEIRTSKYTLMTFLPKNLFIQFHRLAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTSIKDGYEDWRRHRSDRKENNREALVLQSGEFQLKKWEKIRAGEVVKIRVGETIPCDIVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETALAIAEGCSISGLLRCEQPNRNIYEFTANMEFKGHKFPLNQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAVSPSKRSKLEGYMNRETLWLSIFLFVMCLVVSIGMGLWLFRHNNRLDTLPYYRKIYFSTGNENGKTYKYYGIPREIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDKDMYDSSSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVYGKDFGNSLIVADPSKLDDISASLGKKRWKLKYDVPVDLELLKLLHIDITGAAKRAAQEFFLTLAACNTVIPIITDYQCSDANNGSQEDAECIDYQGESPDEQALVIAASAYGYTLFERTSGHIGIDINGVKQSRFDVLGLHEFDSVRKRMSVVIRYPDNIVKVLVKGADTTMLSILANDSEISDDVRSGTQKDLNCYSSQGLRTLIVACRDLTDAELEQWQCLYEDASTSLTDRALKLRQTAAIIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTADMQRIIINGTSENDCRILLTQAMEKCGLKSLDRSKQNLKWRTNSENDYSQALGIAKSAAVAQCCTMKEEGMLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYMILYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKNLSHKTLLKYPKLYCAGHRQEAYNLHLFWITMIDTLWQSLVLFYIPLFTYKESSIDIWSMGSLWTIAVVVLVNVHLAMDVHRWVLITHIAVWGSIVITYACMVVLDSIPIFPNYWTIFNLAKSPTYWLTIFLIIVVALLPRFTVKIVHQSFWPSDIQIAREAEILKKGRDCLGSKRDQSPS 1270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11561537 11566702 + Bda001834.1 Bda01g00066 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00066 1270 Gene3D - 233 399 - -
Bda01g00066 1270 SUPERFAMILY Calcium ATPase, transduction domain A 254 395 IPR008250 -
Bda01g00066 1270 SFLD p-type atpase 527 1026 IPR044492 -
Bda01g00066 1270 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 147 1268 - -
Bda01g00066 1270 Gene3D - 812 1015 IPR023214 -
Bda01g00066 1270 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 945 1061 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g00066 1270 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 475 566 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g00066 1270 CDD P-type_ATPase_APLT_Dnf-like 173 1135 - -
Bda01g00066 1270 Pfam Cation transport ATPase (P-type) 655 736 - -
Bda01g00066 1270 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 549 828 IPR023299 GO:0000166
Bda01g00066 1270 SUPERFAMILY Calcium ATPase, transmembrane domain M 171 1242 IPR023298 -
Bda01g00066 1270 Gene3D - 656 789 IPR023299 GO:0000166
Bda01g00066 1270 ProSitePatterns E1-E2 ATPases phosphorylation site. 545 551 IPR018303 -
Bda01g00066 1270 SUPERFAMILY HAD-like 530 1020 IPR036412 -
Bda01g00066 1270 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 171 1250 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bda01g00066 1270 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 147 1268 - -
Bda01g00066 1270 SFLD Haloacid Dehalogenase 527 1026 - -
Bda01g00066 1270 Pfam Phospholipid-translocating ATPase N-terminal 157 222 IPR032631 -
Bda01g00066 1270 Pfam E1-E2 ATPase 254 501 - -
Bda01g00066 1270 Pfam Phospholipid-translocating P-type ATPase C-terminal 1003 1243 IPR032630 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00066 Bda-Chr1:11561537 Bda15g00417 Bda-Chr15:7046672 0 dispersed
Bda14g00767 Bda-Chr14:5851305 Bda01g00066 Bda-Chr1:11561537 0 transposed
Bda01g00066 Bda-Chr1:11561537 Bda14g01106 Bda-Chr14:9965404 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00066 K14802 - csv:101206692 1902.1