Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00068 ATGAAGTCACTCACAGTGTTTTCAACTTTACCTCTTCTCTTACTCCTTATTTCTCTCCCCAAAATAACATCTAATTTAGATTCAGACAGACAAGCTCTTCTTGCCTTTGCTGCCTCTATTCCTCATGGTCGAAGAGTTAACTGGACTTCTGCTACATCCGTATGCAGTTGGGTTGGGATCACTTGCACCGCAAATCAGTCTGCGGTATTTGCTCTAAGACTCCCTGGTACTGGACTGTATGGCCAAGTACCAGCCAAGACTCTTGGGAAGCTGAGTTCTCTCAGAATACTTAGCCTTCGATCCAATCGTCTCATTGGAAGTCTTCCATCTGACGTTCTGTCCCTCCCCTCCCTCCAGTACATCTATCTACAGCATAATAGCTTTTCTGGTGAAATTCCTTCTTCCATGTCTTCTCAGCTAATTGTTCTTGATTTATCTTTCAATTTTCTCACTGGCAATATTCCTTCAACGATTCAAAATTTAACGAATCTCACTAGCCTCAACCTTCAAAACAACTCTCTTACCGGCTCTGTTCCTGACATCACCACCCCGACTCTTAAACGTTTGAATTTGAGCTTCAACCACCTAAATGGTTCGATTCCCTCTGCACTAAGAACATTTTCCGCTTCATCATTTGAGGGGAACTTAATGTTATGCGGAGCTCCGCTAAACTCATGCTCGTCACTTGTGCCCTCACCTTCTCCTTCTCATTCTCCAGCCACTCATAAACCAAAACATAGAAAGAAACTAAGTATTGCAATTATCATTGCCATTGCAATTGGGGGTTCTGTAGTACTCTTTCTCATTGCTCTGATGATAATAATTTTCTGCTTGAAGAAGAGAGATCGAGATCGTAACGATAACAGTGTGGTAAAAGGAAAGGGTAAAAGGAATGAACAACCTAAGGAGGACTTTGGGAGTGGGATACAAGAGGCCGAAAAGAACAAGTTGGTTTTCTTTGAAGGATGTTGTTTTAACTTCGATCTTGAGGATTTGTTGAGAGCATCAGCTGAAGTTCTGGGAAAGGGGACTTATGGGACTACTTATAAAGCCATCTTGGAGGAGGGTACGACTGTCGTTGTGAAGAGGCTGAAAGAAGTGATGGTTGGTAAAAAGGAGTTCGAGCAGCAAATGGAGATTGTGGGGACGGCTAGTCAGCACCCAAATGTCGTGCCTCTTCGTGCTTACTACTATTCCAAGGATGAAAAGCTTTTGGTTTATGATTACATTGCAGCTGGAAGCTTTTCTGCGATGCTGCATGGAAATACAGCGCCAGATTGGGAATCCAGAATAAAGATTTCACTGGGATGTGCCAGAGGCATAGCACATATCCATTCTGCTAGTGGGGGGAAACTCGTACATGGCAACATAAAATCCTCAAACGTTCTTCTAACCCAAGACCAGAATGGCAGCATCTCAGATTTTGGGCTAACTCCTTTAATGAACTACCCGAATGTACCCCCTAGAACCGGTGGTTATCGAGCTCCTGAGGTGCTTGAAACGCGGAAGTCGACTCAGAAGTCTGATGTCTACAGTTTTGGAGTTGTTCTTCTGGAGATGCTGACTGGGAAAGCACCGGCTCAATCCCCAGGGCGTGAAGATATAGTCGACCTTCCACGGTGGGTCCAGTCCGTGGTTCGAGAGGAATGGACGTCCGAGGTGTTTGATGTTGAGCTGATCAAGTATCAGAACATTGAAGAAGAGCTGGTCCAAATGCTTCAAATAGGCATGGCCTGCGTTGCAAGAATGCCGGACATGAGACCCACGATGGACGAAGTTGTTAGGAAGATGGAGGAAATCAGGTCGCCTGGTTCTGGAACTCGGCCATCATCAGACGAAAACAAGTCCAATGAGTTGTAG 1860 44.89 MKSLTVFSTLPLLLLLISLPKITSNLDSDRQALLAFAASIPHGRRVNWTSATSVCSWVGITCTANQSAVFALRLPGTGLYGQVPAKTLGKLSSLRILSLRSNRLIGSLPSDVLSLPSLQYIYLQHNSFSGEIPSSMSSQLIVLDLSFNFLTGNIPSTIQNLTNLTSLNLQNNSLTGSVPDITTPTLKRLNLSFNHLNGSIPSALRTFSASSFEGNLMLCGAPLNSCSSLVPSPSPSHSPATHKPKHRKKLSIAIIIAIAIGGSVVLFLIALMIIIFCLKKRDRDRNDNSVVKGKGKRNEQPKEDFGSGIQEAEKNKLVFFEGCCFNFDLEDLLRASAEVLGKGTYGTTYKAILEEGTTVVVKRLKEVMVGKKEFEQQMEIVGTASQHPNVVPLRAYYYSKDEKLLVYDYIAAGSFSAMLHGNTAPDWESRIKISLGCARGIAHIHSASGGKLVHGNIKSSNVLLTQDQNGSISDFGLTPLMNYPNVPPRTGGYRAPEVLETRKSTQKSDVYSFGVVLLEMLTGKAPAQSPGREDIVDLPRWVQSVVREEWTSEVFDVELIKYQNIEEELVQMLQIGMACVARMPDMRPTMDEVVRKMEEIRSPGSGTRPSSDENKSNEL 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11807725 11809818 + Bda001837.1 Bda01g00068 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00068 619 Pfam Protein kinase domain 337 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00068 619 SUPERFAMILY L domain-like 40 220 - -
Bda01g00068 619 ProSiteProfiles Protein kinase domain profile. 334 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00068 619 MobiDBLite consensus disorder prediction 286 307 - -
Bda01g00068 619 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Bda01g00068 619 PANTHER OS05G0588300 PROTEIN 11 616 - -
Bda01g00068 619 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Bda01g00068 619 Gene3D Transferase(Phosphotransferase) domain 1 411 616 - -
Bda01g00068 619 SUPERFAMILY Protein kinase-like (PK-like) 338 597 IPR011009 -
Bda01g00068 619 SMART LRR_typ_2 161 184 IPR003591 -
Bda01g00068 619 SMART LRR_typ_2 91 115 IPR003591 -
Bda01g00068 619 ProSitePatterns Protein kinases ATP-binding region signature. 340 371 IPR017441 GO:0005524
Bda01g00068 619 CDD STKc_IRAK 340 600 - -
Bda01g00068 619 Gene3D Ribonuclease Inhibitor 184 227 IPR032675 -
Bda01g00068 619 PANTHER OS05G0480400 PROTEIN 11 616 - -
Bda01g00068 619 MobiDBLite consensus disorder prediction 598 619 - -
Bda01g00068 619 Pfam Leucine Rich Repeat 186 204 IPR001611 GO:0005515
Bda01g00068 619 Pfam Leucine Rich Repeat 140 161 IPR001611 GO:0005515
Bda01g00068 619 Gene3D Phosphorylase Kinase; domain 1 302 409 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00068 Bda-Chr1:11807725 Bda09g00021 Bda-Chr9:334378 0 dispersed
Bda11g00126 Bda-Chr11:1705789 Bda01g00068 Bda-Chr1:11807725 0 transposed
Bda01g00068 Bda-Chr1:11807725 Bda14g01104 Bda-Chr14:9917092 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69410 PF00069 Pkinase 6.20E-38 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00068 - - csv:101210437 823.928