Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00152 ATGGCCGCCACTACGACCGCAGCCGCAGCCTCCTCCTTCATTGGAACCCGCTTGCCAGAGGTTCACTCAAACGCAGGGAGAGTCCAAGCCCGGTTCGGATTCGGAAAGAAAGGCCCCGCCAAGAAAGTGAAGAAGCCTAGTTTTGATCGTCCTCTCTGGTATCCCGGAGCAAAAGCGCCAGAATGGCTTGACGGGAGCTTAGTCGGAGATTATGGGTTCGATCCGTTTGGTCTGGGCAAACCTGCCGAGTACTTGCAGTTTGATTTGGACTCTCTGGATCAGAACCTTTCTAAGAACAAAGCTGGAGACGTAATCGGAACCAGATTTGAGAGCGGCGATGTAAAGTCGACTCCTTTCCAACCTTACACTGAGGTTTTTGGGTTGCAGAGGTTCCGTGAGTGTGAACTCATCCATGGAAGGTGGGCTATGTTGGCCACGCTCGGTGCCATTACTGTTGAGTGGCTTACCGGAGTTACCTGGCAAGACGCCGGAAAGAGAAATCTTCAAATTTTCTTTCATGGCGAAGCTGATTTATTTATTTTGGCACATCAGGTAGAGCTAGTGGATGGATCATCATATCTGGGCCAACCCCTTCCATTCTCCATTTCCACATTGATATGGATCGAAGTTTTGGTGATTGGATACATCGAATTCCAGAGAAATGCAGAGCTTGACCCGGAGAAGAGGCTGTACCCCGGGGGAAAATACTTCGACCCATTAGGCTTAGCTGCCGATCCAGAGAAGAAGGCGACGCTGCAGTTGGCTGAAATCAAGCACGCTCGCCTAGCTATGATTGGTTTCCTAGGCTTTGCCGTTCAAGCTGCAGCCACAGGTAAAGGTCCTCTCAACAACTGGGCCACCCATTTGAGCGATCCTCTCCACACCACCATCATCGACACTTTTACCTCCTAA 912 50.77 MAATTTAAAASSFIGTRLPEVHSNAGRVQARFGFGKKGPAKKVKKPSFDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLSKNKAGDVIGTRFESGDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKRNLQIFFHGEADLFILAHQVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMIGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFTS 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22301994 22302963 + Bda002023.2 Bda01g00152 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00152 303 Gene3D Chlorophyll a/b binding protein domain 53 303 - -
Bda01g00152 303 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 182 300 - -
Bda01g00152 303 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 1 168 - -
Bda01g00152 303 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 182 300 IPR001344 GO:0009765|GO:0016020
Bda01g00152 303 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 168 IPR001344 GO:0009765|GO:0016020
Bda01g00152 303 SUPERFAMILY Chlorophyll a-b binding protein 46 302 - -
Bda01g00152 303 Pfam Chlorophyll A-B binding protein 59 274 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00152 Bda-Chr1:22301994 Bda07g01019 Bda-Chr7:12003057 0 dispersed
Bda01g00152 Bda-Chr1:22301994 Bda05g00930 Bda-Chr5:57875719 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00152 K08915 - pvy:116111846 498.049