Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00187 ATGGCGGAAGAGTTGAAGCTGTTTGGAGCAACGGGAAGCCCATTCAGCCACAGAGTGGAGGTGGCTCTGAAACTGAAAGGCGTCGAATATGAATACGTCGAAGAAGACGTGTACGGAACCAAAAGCTCAGAGCTTCTGAAATACAATCCGGTTCACAAGAAGATTCCCGTGCTTCTGCACAACGGGAAGCCCTTGGCTGAATCCCTCGTCATTCTTGAGTACATCGACGACGTGTTCGTAGGTCATCCTCTCCTGCCAAAGGATCCGTACGACAAAGCCATGGCTCGATTCTGGGCCAAGTTCTTCGACGACAAGGTCCGTCCGAGCTTATGGAAAGCTTGCTGGAGTGAGGGGGAGGAGAGAGAAAAGGCGGTGGAGGAGGCGAAGGAGGTTCTGAAAATCCTAGAAGACGAGCTGGGCGATAAGCGATTCTTCGGAGGAGAGGCGGTCGGATATGTCGACATTGCTGCCAACTCCTTAAGCTTTTGGTATGGGATTTTTCAAGAACTAGGCGGACTTGAATTGCTGACCACTAACGACTTCCCCAAGCTCTGCCAATGGCGGGAGGAGTTTGTTAGTCAGAGCTGTGTCAAAGCAACTCTGCCTCAGAAGGAAAGTTTACTCGCACTTCTGCAATCTCGGGTCGCCAAGAAGAAATTTGAATTTCGTTAA 672 50.6 MAEELKLFGATGSPFSHRVEVALKLKGVEYEYVEEDVYGTKSSELLKYNPVHKKIPVLLHNGKPLAESLVILEYIDDVFVGHPLLPKDPYDKAMARFWAKFFDDKVRPSLWKACWSEGEEREKAVEEAKEVLKILEDELGDKRFFGGEAVGYVDIAANSLSFWYGIFQELGGLELLTTNDFPKLCQWREEFVSQSCVKATLPQKESLLALLQSRVAKKKFEFR 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24382576 24383315 + Bda002089.1 Bda01g00187 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00187 223 Gene3D - 85 220 - -
Bda01g00187 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 220 IPR010987 -
Bda01g00187 223 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Bda01g00187 223 Coils Coil 118 138 - -
Bda01g00187 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Bda01g00187 223 Gene3D Glutaredoxin 1 84 - -
Bda01g00187 223 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Bda01g00187 223 Pfam Glutathione S-transferase, C-terminal domain 118 194 IPR004046 -
Bda01g00187 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Bda01g00187 223 SFLD Main (cytGST) 2 218 - -
Bda01g00187 223 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 4 214 - -
Bda01g00187 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 214 IPR045073 -
Bda01g00187 223 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Bda01g00187 223 CDD GST_N_Tau 5 79 - -
Bda01g00187 223 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00187 Bda-Chr1:24382576 Bda03g00799 Bda-Chr3:6775962 7.84E-104 dispersed
Bda01g00187 Bda-Chr1:24382576 Bda01g00194 Bda-Chr1:24604886 6.91E-153 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00187 K00799 - tcc:18597654 273.478