Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda01g00194 | ATGCCCAATTCCATTACGAACAGGTCAAACAGGTTAGAGTCAGTGACGATGGCGGAAGAGTTGAAGCTGTTTGGAGCAACGGGAAGCCCATTCAGCCACAGAGTGGAGGTGGCTCTGAAACTGAAAGGCGTCGAATATGAATACGTCGAAGAAGACGTGTACGGAACCAAAAGCTCAGAGCTTCTGAAATACAATCCGGTTCACAAGAAGATTCCAGTGCTTCTGCACAACGGGAAGCCCTTGGCTGAATCCCTCGTCATTCTTGAGTACATCGACGACGCGTTCGGAGGTTATCCTCTCCTGCCAAAGGATCCGTACGACAAAGCCATGGCTCGATTCTGGGCCAAGTTCTTCGACGACAAGGTCCGTCCGAGCTTATGGAAAGCTTGCTGGAGTGTGGGGGAGGAGAGAGAAAAGGCGATGGAGGAGGCGAAGGAGGTTCTGAAAATCCTAGAAAACGAGCTGGGCGATAAGCGATTCTTCGGAGGAGAGGCCGTCGGATATGTCGACATTGCTGCCAACTCCTTAAGCTTTTGGTATGGGATTTTTCAAGAACTAGTCGGACTTGAATTGCTGACCACTAACGACTTCCCCAAGCTCTGCCGATGGCGGGAGGAGTTTGTTAGTCAGAGCTGTGTCAAAGAAACTCTGCCTCAGAAGGAAAGCTTACTCGCATTTCTGCAATCTCGCTTCGCCAAGAAGAAACTTGAATGCCCTTAA | 720 | 50.14 | MPNSITNRSNRLESVTMAEELKLFGATGSPFSHRVEVALKLKGVEYEYVEEDVYGTKSSELLKYNPVHKKIPVLLHNGKPLAESLVILEYIDDAFGGYPLLPKDPYDKAMARFWAKFFDDKVRPSLWKACWSVGEEREKAMEEAKEVLKILENELGDKRFFGGEAVGYVDIAANSLSFWYGIFQELVGLELLTTNDFPKLCRWREEFVSQSCVKETLPQKESLLAFLQSRFAKKKLECP | 239 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 24604886 | 24605672 | - | Bda002102.1 | Bda01g00194 | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda01g00194 | 239 | Pfam | Glutathione S-transferase, C-terminal domain | 135 | 210 | IPR004046 | - | |
| Bda01g00194 | 239 | CDD | GST_C_Tau | 105 | 230 | IPR045074 | GO:0004364|GO:0006749 | |
| Bda01g00194 | 239 | Coils | Coil | 134 | 154 | - | - | |
| Bda01g00194 | 239 | Gene3D | - | 101 | 237 | - | - | |
| Bda01g00194 | 239 | SUPERFAMILY | Thioredoxin-like | 21 | 122 | IPR036249 | - | |
| Bda01g00194 | 239 | Gene3D | Glutaredoxin | 15 | 100 | - | - | |
| Bda01g00194 | 239 | Pfam | Glutathione S-transferase, N-terminal domain | 20 | 92 | IPR004045 | - | |
| Bda01g00194 | 239 | SFLD | Glutathione Transferase (cytosolic) | 17 | 235 | IPR040079 | - | |
| Bda01g00194 | 239 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 19 | 99 | IPR004045 | - | |
| Bda01g00194 | 239 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 104 | 231 | IPR010987 | - | |
| Bda01g00194 | 239 | SFLD | Main.3: Omega- and Tau-like | 17 | 235 | IPR045073 | - | |
| Bda01g00194 | 239 | SUPERFAMILY | GST C-terminal domain-like | 93 | 232 | IPR036282 | - | |
| Bda01g00194 | 239 | CDD | GST_N_Tau | 21 | 95 | - | - | |
| Bda01g00194 | 239 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 20 | 231 | IPR045073 | - | |
| Bda01g00194 | 239 | PANTHER | GLUTATHIONE S-TRANSFERASE-RELATED | 20 | 231 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00194 | Bda-Chr1:24604886 | Bda05g00801 | Bda-Chr5:56458421 | 3.40E-52 | dispersed | |
| Bda01g00187 | Bda-Chr1:24382576 | Bda01g00194 | Bda-Chr1:24604886 | 6.91E-153 | proximal | |
| Bda08g00016 | Bda-Chr8:151173 | Bda01g00194 | Bda-Chr1:24604886 | 6.51E-63 | transposed | |
| Bda14g00849 | Bda-Chr14:6537819 | Bda01g00194 | Bda-Chr1:24604886 | 2.16E-49 | transposed | |
| Bda01g00194 | Bda-Chr1:24604886 | Bda03g00799 | Bda-Chr3:6775962 | 5.51E-105 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda01g00194 | K00799 | - | vvi:100242547 | 278.87 |