Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00194 ATGCCCAATTCCATTACGAACAGGTCAAACAGGTTAGAGTCAGTGACGATGGCGGAAGAGTTGAAGCTGTTTGGAGCAACGGGAAGCCCATTCAGCCACAGAGTGGAGGTGGCTCTGAAACTGAAAGGCGTCGAATATGAATACGTCGAAGAAGACGTGTACGGAACCAAAAGCTCAGAGCTTCTGAAATACAATCCGGTTCACAAGAAGATTCCAGTGCTTCTGCACAACGGGAAGCCCTTGGCTGAATCCCTCGTCATTCTTGAGTACATCGACGACGCGTTCGGAGGTTATCCTCTCCTGCCAAAGGATCCGTACGACAAAGCCATGGCTCGATTCTGGGCCAAGTTCTTCGACGACAAGGTCCGTCCGAGCTTATGGAAAGCTTGCTGGAGTGTGGGGGAGGAGAGAGAAAAGGCGATGGAGGAGGCGAAGGAGGTTCTGAAAATCCTAGAAAACGAGCTGGGCGATAAGCGATTCTTCGGAGGAGAGGCCGTCGGATATGTCGACATTGCTGCCAACTCCTTAAGCTTTTGGTATGGGATTTTTCAAGAACTAGTCGGACTTGAATTGCTGACCACTAACGACTTCCCCAAGCTCTGCCGATGGCGGGAGGAGTTTGTTAGTCAGAGCTGTGTCAAAGAAACTCTGCCTCAGAAGGAAAGCTTACTCGCATTTCTGCAATCTCGCTTCGCCAAGAAGAAACTTGAATGCCCTTAA 720 50.14 MPNSITNRSNRLESVTMAEELKLFGATGSPFSHRVEVALKLKGVEYEYVEEDVYGTKSSELLKYNPVHKKIPVLLHNGKPLAESLVILEYIDDAFGGYPLLPKDPYDKAMARFWAKFFDDKVRPSLWKACWSVGEEREKAMEEAKEVLKILENELGDKRFFGGEAVGYVDIAANSLSFWYGIFQELVGLELLTTNDFPKLCRWREEFVSQSCVKETLPQKESLLAFLQSRFAKKKLECP 239
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 24604886 24605672 - Bda002102.1 Bda01g00194 194
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00194 239 Pfam Glutathione S-transferase, C-terminal domain 135 210 IPR004046 -
Bda01g00194 239 CDD GST_C_Tau 105 230 IPR045074 GO:0004364|GO:0006749
Bda01g00194 239 Coils Coil 134 154 - -
Bda01g00194 239 Gene3D - 101 237 - -
Bda01g00194 239 SUPERFAMILY Thioredoxin-like 21 122 IPR036249 -
Bda01g00194 239 Gene3D Glutaredoxin 15 100 - -
Bda01g00194 239 Pfam Glutathione S-transferase, N-terminal domain 20 92 IPR004045 -
Bda01g00194 239 SFLD Glutathione Transferase (cytosolic) 17 235 IPR040079 -
Bda01g00194 239 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 19 99 IPR004045 -
Bda01g00194 239 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 231 IPR010987 -
Bda01g00194 239 SFLD Main.3: Omega- and Tau-like 17 235 IPR045073 -
Bda01g00194 239 SUPERFAMILY GST C-terminal domain-like 93 232 IPR036282 -
Bda01g00194 239 CDD GST_N_Tau 21 95 - -
Bda01g00194 239 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 20 231 IPR045073 -
Bda01g00194 239 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 20 231 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00194 Bda-Chr1:24604886 Bda05g00801 Bda-Chr5:56458421 3.40E-52 dispersed
Bda01g00187 Bda-Chr1:24382576 Bda01g00194 Bda-Chr1:24604886 6.91E-153 proximal
Bda08g00016 Bda-Chr8:151173 Bda01g00194 Bda-Chr1:24604886 6.51E-63 transposed
Bda14g00849 Bda-Chr14:6537819 Bda01g00194 Bda-Chr1:24604886 2.16E-49 transposed
Bda01g00194 Bda-Chr1:24604886 Bda03g00799 Bda-Chr3:6775962 5.51E-105 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00194 K00799 - vvi:100242547 278.87