Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00200 GAGTTCAGCGAGAGGTTGAGTTACTACGGAATAGCCACAAGCTTGATCTTATATCTGACCCGGGTTATTCATCAAGACGTCAAATCGGCGGCGAGGAATGTGAACTACTGGTCCGGCGTAACAACGTTGATGCCACTGCTCGGAGGATTCGTCGCCGACGCTTACTTGGGTCGCTTTTCCACCGTCCTAGTTTCCTCCATAATCTACACCTTGGGATTGACCCTTTTAATATTGGCGTCCTTCGTGCCAAGCTTGAAGGCTTGTGAGAGCAGTGATGTCTGCAAGGAACCAAGGAAGGTTCATGAGGTCGTCTTCTTTCTCGCCATTTACCTAATCTCCGTAGGAACCGGAGGGCATAAACCCTCATTGGAGAGCTTCGGAGCAGACCAATTTGATGATGATCACACCAAAGAAAGAAAACAAAAAATGTCGTTTTTCAACTGGTGGACGTTTGGGCTATGCTCCGGGGTCTTGATGGGCGTCACTGTGATTGTTTACGTTCAAGATCATTACGGCTGGGGAGTTTCAGACATTATTCTCGCAGCAGTAATGGCGGTTTCGATAGTCATCTTTCTCCTTGGGAGACCATACTATCGCTTCAGGGCTCCGTCGGGAAGTCCCTTGACACCCATGGCGCAGGTTCTGGTAGCCGCCATTAGAAAAAGAAAGCTTCCTTATCCTTCCGACAATATTGACTTGCATGAAGTTTCCATGAGAGAGAAGCTGGTCAATGGAAGATTCTTATGCCACACCAAGAAGCTCAAGTTTCTAGACAAAGCGGCCATTGTTGAAGACGCAGAAAACTTGGATGAAAAACGGAGAGCAAGCCCATGGAGGTTAGCGACAGTAACCAAAGTGGAAGAACTGAAACTAATTCTAAATATGATTCCCATCTGGCTTTCCACTTTGCCATTCGGAATCTGCGTCGCTCAATCTTCTACTTTCTTCATCAAACAAGCCGTTACACTGGACCGGAAGATCTTCCATGGCACCTTCCTCATCCCCGCAGCCTCCATTTTCGCCCTATCCGCCGTCGGAATGATAATATGCGTTGCCATTTACGACAAACTATTAGTTCCCTTTTGCCGGCGAGCAACCGGCAATGAAAGAGGCATCAGCATTCTGCAGAGGATCGGAATCGGAATGATCTTCTCAGTCGCAACGATGGTGATCGCCGCTCTGGTTGAGAGAAAGAGATTAAACGTCGTCGACCAGAACGGCCCGCTAATCGGGTCGACTACCATGAGCGTGTTCTGGCTAGCGCCGCAGTTCGTCGTCATCGGAATCGGAGACGGGTTCACGCTCGTTGGCCTGCAAGAGTATTTTTACGATCAGGTTCCGGATTCCATGCGGAGTCTAGGGATAGCTTTTTATCTGAGTGTGATAGGCGCCGGAAACTTCGTCAGTAGTTTGCTGATAACAGCGGTGGATAGGATAACGACGAAGATTGGGGAGAGTTGGTTTGGAGGAGAGCTCAATAGTAGCCGTGTAGATAACTTCTACTGGTTACTAGCCGCCATTGCTGCAGCTAACTTGTGCGTTTATGTAATCTTGGCTCGTCGCTACTCGTACAAAAATGTTCAGAGAGTTGCAGTGGCCTGA 1602 48.63 EFSERLSYYGIATSLILYLTRVIHQDVKSAARNVNYWSGVTTLMPLLGGFVADAYLGRFSTVLVSSIIYTLGLTLLILASFVPSLKACESSDVCKEPRKVHEVVFFLAIYLISVGTGGHKPSLESFGADQFDDDHTKERKQKMSFFNWWTFGLCSGVLMGVTVIVYVQDHYGWGVSDIILAAVMAVSIVIFLLGRPYYRFRAPSGSPLTPMAQVLVAAIRKRKLPYPSDNIDLHEVSMREKLVNGRFLCHTKKLKFLDKAAIVEDAENLDEKRRASPWRLATVTKVEELKLILNMIPIWLSTLPFGICVAQSSTFFIKQAVTLDRKIFHGTFLIPAASIFALSAVGMIICVAIYDKLLVPFCRRATGNERGISILQRIGIGMIFSVATMVIAALVERKRLNVVDQNGPLIGSTTMSVFWLAPQFVVIGIGDGFTLVGLQEYFYDQVPDSMRSLGIAFYLSVIGAGNFVSSLLITAVDRITTKIGESWFGGELNSSRVDNFYWLLAAIAAANLCVYVILARRYSYKNVQRVAVA 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24772930 24776772 + Bda002111.1 Bda01g00200 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00200 533 Pfam POT family 59 484 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bda01g00200 533 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 48 72 IPR018456 GO:0006857|GO:0016020|GO:0022857
Bda01g00200 533 Gene3D MFS general substrate transporter like domains 1 531 IPR036259 -
Bda01g00200 533 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 1 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bda01g00200 533 SUPERFAMILY MFS general substrate transporter 8 525 IPR036259 -
Bda01g00200 533 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 1 529 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00200 Bda05g00950 CCT
Bda01g00200 Bda03g01378 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00200 Bda-Chr1:24772930 Bda14g00442 Bda-Chr14:3169683 2.41E-152 dispersed
Bda03g01378 Bda-Chr3:49956117 Bda01g00200 Bda-Chr1:24772930 0 transposed
Bda01g00200 Bda-Chr1:24772930 Bda15g00240 Bda-Chr15:5049919 0 wgd
Bda01g00200 Bda-Chr1:24772930 Bda05g00950 Bda-Chr5:58019524 3.27E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00200 - - tcc:18597665 807.749