Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00220 ATGGCTACCCCTAGGTTCCGAGCTCTTCTTCGATGGAAAAAATGGTCTAGGAAGGACTGGGCAATCCTTGGGGCTGGTTTCGCCTTCATCCTTTTTTTCCTATCTTTTGCTTCCGATGGGTATCGCGAAGACTCCCGCGCGGATCTTCGATTCCAACTCGCCCCTCGAACTGCGGATTTGGTCGATTTGACTCTGTTACGCAATGCCAAGGATAGTGGAGCTGTGTGTTTGGATGGGAGTTTGCCTGGGTACCATTTTCTTAAGGGTTTCGGGTCTGGTTCTAGTAATTGGGTGCTTCACATTGAGGGAGGAGGTTGGTGTGATTCAGTTGCATCTTGTTCTTCGCGTAAAATGACCTCTTTAGGTTCATCCAAGCTCATGGATACTAAAGATCGCTTCGCTGGAATTTTAAGCCGTGACCCATTACAGAATCCTGGTAAAACAATAATGTCATTGCTACTTGTGATTTACAAAATGCTATATATTGTGATGTTTGTAGCAATCAAAGGTTTGTTCTTGAATGATGTAAAAGTGATCATTTCAAGCGTTAATGGACCTAAACTTCACTTCAGAGGAAATCTCATCTGGGAAGCAGTTATGGATGAGCTATTAGCAGCTGGCTTGTCAAAGGCAAAAAATGCTCTTCTTTCAGGATGCTCTGCTGGTGGTTTGGCAACCCTAATCCATTGTGATGACTTTCGAATGCGACTCCCAAAGGATGCAACAGCAAAATGTCTAGCTGATGCTGGGTTTTTCCTTGATGAGAAAGACGTCACTGGAAATCATACCATGAGATCTTTCTATAGAGATACTGTCTACCTTCAGTGTTTCTTTCCTCTGGAAGTCATAAAAAACATACGCACACCAGTGTTCATTGTCAACCCCGCTTATGATTTCTGGCAGATACAACATGTCTTAGCACCTGATGGATCAGATCCTGCTGGCTATTGGCAGAGCTGTAAACTTAACATTCGTAATTGCAATCACGAGCAGCTAGAAACTCTACATGAATTTCGAAGTTCTTTGTTGAAGTCACTGGATGAGTTCCAGCAAATGAAAGGAGGGGGAATGTTTATAAATTCTTGCTTCATTCATTGCCAGACATGGTTTACAGAGACATGGCATTCCCCCACTTCTCCAAGAATAAACAATAAGACAATAGCCGAAGCAGTAGGTGATTGGTACTTTGACCGTCAAGTGACAAAGCTAATCGACTGTCCTTATCCATGCAATCCCACCTGCTTCAATATGGATTTCACTCGAGGTCGATCAAATTAA 1278 43.11 MATPRFRALLRWKKWSRKDWAILGAGFAFILFFLSFASDGYREDSRADLRFQLAPRTADLVDLTLLRNAKDSGAVCLDGSLPGYHFLKGFGSGSSNWVLHIEGGGWCDSVASCSSRKMTSLGSSKLMDTKDRFAGILSRDPLQNPGKTIMSLLLVIYKMLYIVMFVAIKGLFLNDVKVIISSVNGPKLHFRGNLIWEAVMDELLAAGLSKAKNALLSGCSAGGLATLIHCDDFRMRLPKDATAKCLADAGFFLDEKDVTGNHTMRSFYRDTVYLQCFFPLEVIKNIRTPVFIVNPAYDFWQIQHVLAPDGSDPAGYWQSCKLNIRNCNHEQLETLHEFRSSLLKSLDEFQQMKGGGMFINSCFIHCQTWFTETWHSPTSPRINNKTIAEAVGDWYFDRQVTKLIDCPYPCNPTCFNMDFTRGRSN 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25784663 25788148 + Bda002149.2 Bda01g00220 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00220 425 SUPERFAMILY alpha/beta-Hydrolases 196 305 IPR029058 -
Bda01g00220 425 Pfam Pectinacetylesterase 58 400 IPR004963 GO:0016787
Bda01g00220 425 PANTHER PECTIN ACETYLESTERASE 4 14 414 - -
Bda01g00220 425 PANTHER NOTUM-RELATED 14 414 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00220 Bda-Chr1:25784663 Bda08g00443 Bda-Chr8:4535050 9.35E-120 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00220 K19882 - nnu:104594550 541.962