Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00233 ATGGCTGGCAAGGGAGAAGGTCCGGCCATCGGAATTGATCTCGGTACTACCTACTCTTGCGTTGGTGTTTGGCAACATGATCGCGTCGAGATCATTGCCAACGACCAGGGTAACAGGACGACGCCGTCCTATGTTGGTTTTACCGATTCCGAGCGTCTGATCGGGGATGCAGCCAAGAATCAGGTCGCCATGAATCCCATCAACACCGTCTTTGATGCTAAGAGGTTGATAGGTCGCAGATTTAGCGATGCCCCAGTCCAAAGTGACATTAAGTTGTGGCCATTCAAGGTCATTCCTGGTGCTGGTGACAAGCCCATGATCGTAGTCAACTACAAAGGTGAAGAGAAGCAATTTGCTGCTGAAGAGATCTCTTCTATGGTCCTCATTAAAATGCGTGAGATTGCAGAGGCCTACCTTGGTTCGACTATCAAGAATGCTGTTGTTACTGTCCCTGCTTACTTCAATGATTCTCAGCGTCAGGCTACCAAGGATGCTGGTGTCATTGCTGGTCTCAATGTCATGCGAATTATTAATGAGCCCACAGCTGCTGCTATTGCTTATGGGCTTGACAAGAAGGCCACAAGTGTGGGTGAGAAGAATGTTTTGATCTTCGACCTTGGTGGTGGTACTTTTGATGTATCTCTTCTCACCATTGAAGAGGGTATCTTTGAGGTGAAGGCCACTGCTGGTGACACCCATCTTGGTGGTGAAGATTTTGATAACAGAATGGTTAACCATTTCGTACAAGAGTTCAAGAGGAAGAACAAGAAGGACATTAGTGGCAACCCTAGAGCACTGAGGAGGCTGAGGACATCCTGTGAGAGAGCCAAGAGGACACTGTCTTCCACTGCTCAGACAACCATTGAAATTGACTCCTTGTACGAAGGAATTGATTTCTACTCCACCATTACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTTTAGAAAGTGTATGGAACCTGTTGAGAAATGTTTGAGGGATGCAAAGATGGACAAAAGCTCGGTCCATGATGTTGTTCTTGTAGGTGGTTCTACCAGAATTCCCAAGGTGCAACAGCTTCTTCAGGATTTCTTCAATGGTAAGGAACTCTGCAAGAGCATCAATCCGGACGAAGCTGTGGCATATGGTGCGGCCGTTCAAGCTGCTATCTTGAGTGGTGAAGGTAATGAGAAGGTTCAGGATCTCCTTCTCTTGGACGTTACCCCACTCTCCCTCGGTTTGGAAACGGCTGGAGGTGTGATGACTGTTCTGATACCGAGGAACACAACTATTCCAACTAAGAAAGAACAAGTTTTCTCAACCTACTCGGATAACCAGCCTGGTGTGTTGATCCAAGTGTATGAAGGGGAGAGAACAAGGACCCGGGACAACAATTTGCTGGGTAAGTTCGAGTTGTCGGGCATTCCTCCTGCCCCCAGAGGTGTACCCCAAATCACAGTCTGCTTCGATATTGATGCTAATGGTATCTTGAACGTATCTGCGGAGGACAAGACCACGGGTCAGAAGAACAAGATCACAATTACAAATGACAAGGGAAGACTTTCCAAGGATGAGATTGAAAAGATGGTACAGGAAGCCGAGAAGTACAAGTCTGAAGATGAAGAGCACAAGAAGAGGGTAGAATCAAAAAATGCGTTGGAGAACTACGCGTACAACATGAGAAACACAGTGAAGGATGAGAAGATTGGCGCCAAGCTTTCCCCCGAGGATAAGAAGAAGATTGAAGATGCAATTGAGCAGGCTATCCAATGGCTGGACAGCAATCAACTTGCGGAGGCTGATGAGTTTGACGACAAGATGAAGGAATTGGAGAGCGTGTGCAACCCCATAATTGCGAAGATGTACCAGGGTGCGGGCGGTGACATGGGTGGTGGTATGGATGAAGGTGCCCCTGCCGGTGGAAGCGGTGCCGGGCCCAAGATTGAGGAAGTTGATTAA 1944 47.69 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDAPVQSDIKLWPFKVIPGAGDKPMIVVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKRVESKNALENYAYNMRNTVKDEKIGAKLSPEDKKKIEDAIEQAIQWLDSNQLAEADEFDDKMKELESVCNPIIAKMYQGAGGDMGGGMDEGAPAGGSGAGPKIEEVD 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26390836 26393392 + Bda002166.1 Bda01g00233 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00233 647 Gene3D - 192 366 - -
Bda01g00233 647 PRINTS 70kDa heat shock protein signature 36 48 - -
Bda01g00233 647 PRINTS 70kDa heat shock protein signature 396 415 - -
Bda01g00233 647 PRINTS 70kDa heat shock protein signature 477 493 - -
Bda01g00233 647 PRINTS 70kDa heat shock protein signature 209 219 - -
Bda01g00233 647 PRINTS 70kDa heat shock protein signature 146 166 - -
Bda01g00233 647 PRINTS 70kDa heat shock protein signature 369 389 - -
Bda01g00233 647 PRINTS 70kDa heat shock protein signature 8 21 - -
Bda01g00233 647 PRINTS 70kDa heat shock protein signature 58 66 - -
Bda01g00233 647 PRINTS 70kDa heat shock protein signature 337 353 - -
Bda01g00233 647 Gene3D - 71 126 - -
Bda01g00233 647 Gene3D Actin; Chain A, domain 4 235 318 - -
Bda01g00233 647 Coils Coil 521 541 - -
Bda01g00233 647 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Bda01g00233 647 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Bda01g00233 647 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Bda01g00233 647 Gene3D - 545 619 IPR029048 -
Bda01g00233 647 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Bda01g00233 647 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Bda01g00233 647 Gene3D - 10 384 - -
Bda01g00233 647 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Bda01g00233 647 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Bda01g00233 647 MobiDBLite consensus disorder prediction 623 647 - -
Bda01g00233 647 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Bda01g00233 647 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 622 IPR029048 -
Bda01g00233 647 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Bda01g00233 647 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Bda01g00233 647 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00233 Bda-Chr1:26390836 Bda03g00776 Bda-Chr3:6509888 0 dispersed
Bda01g00233 Bda-Chr1:26390836 Bda15g00221 Bda-Chr15:4939002 0 wgd
Bda01g00233 Bda-Chr1:26390836 Bda05g00971 Bda-Chr5:58206516 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00233 K03283 - rcu:8279580 1210.67