Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00267 ATGCGTTGGATTCCGTGTTCAGGGGACTCGAACCGAAAAGCCATGTCAAAGAAGAAGAAGAAGAAGAAGATGGAACTGCTGATGAACAAAGTTGACCATATCAAACCTACTTCAGATAAGTCAAAGGTGAATTCCTCCTTGAGTGTCAAAGGAACATCTGCAAATGGAGGGTCTAGTCAAATTGCAGCTCAGACATTCACATTTCATGAACTGGCCTCAGCAACTAGAAATTTCAGGGCAGAATGTCTTTTGGGAGAGGGAGGTTTTGGTCGAGTTTATAAAGGACACTTAGGAAACACTAATCAAGTTGTTGCTATTAAGCAACTCGATCGAAACGGGTTGCAAGGAAACCGAGAATTTCTCGTCGAAGTGTTGATGTTGAGTCTTCTACATCATCCTAACCTTGTCAATCTTATAGGGTATTGTGCTGATGGAGATCAGAGGCTGCTGGTTTATGAATATATGTCTCTTGGATCATTGGAGGATCATTTACATGATGTTTTGCCTGGTACAAGAAAGCTGGATTGGAATACAAGAATGAAAATAGCAGCTGGGGCAGCAAAAGGGCTGGAGTACTTACACGACAAGGCCAGTCCTCCAGTAATTTACAGAGATTTGAAGTGTTCAAACATTTTGTTGGGTGAAAACTATCATCCTAAGTTGTCTGATTTCGGGTTAGCAAAAGTAGGTCCTGTTGGAGACAACACCCATGTTTCCACCAGAGTTATGGGTACTTACGGATATTGCGCTCCAGAATATGCTAAAACCGGTCAGTTAACTCTCAAATCAGATGTTTACAGCTTCGGAGTTGTGCTTCTGGAGATCGTCACCGGCCGGAAAGCCATTGATGATACCAAAAAAGCTTCTGGAGAGCAGAATCTTGTTGCATGGGCAAGACCGTTGTTTAAAGATCGAAACAAGCTTTCACAAATGGCGGATCCGGCGCTGAAAGGCCAATACCCATCAAGGGGATTATACCAAGCCATTGCCATTGCAGAAATGTGCGTTCAAGAGCAGCCTCATTTGCGACCCGTCATAGTTGATGTGGTCACTGCCCTCACTTACCTTGCTTTGCAGAGATTCGACCCAAATTCAGAACCAGCTCGAAGCCCTCTTCATCCTTCTCTTACTTCTCCTAGAACCAGCTCTAAGAAAATCAATATCTACGAGAGAAACCCCACCCGGAAATTTGATTGA 1197 43.69 MRWIPCSGDSNRKAMSKKKKKKKMELLMNKVDHIKPTSDKSKVNSSLSVKGTSANGGSSQIAAQTFTFHELASATRNFRAECLLGEGGFGRVYKGHLGNTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLHDVLPGTRKLDWNTRMKIAAGAAKGLEYLHDKASPPVIYRDLKCSNILLGENYHPKLSDFGLAKVGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIVTGRKAIDDTKKASGEQNLVAWARPLFKDRNKLSQMADPALKGQYPSRGLYQAIAIAEMCVQEQPHLRPVIVDVVTALTYLALQRFDPNSEPARSPLHPSLTSPRTSSKKINIYERNPTRKFD 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27218381 27220512 - Bda002212.1 Bda01g00267 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00267 398 PANTHER OS07G0668900 PROTEIN 1 384 - -
Bda01g00267 398 MobiDBLite consensus disorder prediction 1 22 - -
Bda01g00267 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Bda01g00267 398 MobiDBLite consensus disorder prediction 34 57 - -
Bda01g00267 398 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Bda01g00267 398 MobiDBLite consensus disorder prediction 370 388 - -
Bda01g00267 398 SUPERFAMILY Protein kinase-like (PK-like) 64 383 IPR011009 -
Bda01g00267 398 Gene3D Phosphorylase Kinase; domain 1 62 154 - -
Bda01g00267 398 Gene3D Transferase(Phosphotransferase) domain 1 155 365 - -
Bda01g00267 398 Pfam Protein kinase domain 82 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00267 398 MobiDBLite consensus disorder prediction 40 57 - -
Bda01g00267 398 ProSiteProfiles Protein kinase domain profile. 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00267 398 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 384 - -
Bda01g00267 398 SMART serkin_6 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00267 398 CDD STKc_IRAK 84 354 - -
Bda01g00267 398 MobiDBLite consensus disorder prediction 364 398 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00267 Bda-Chr1:27218381 Bda14g01130 Bda-Chr14:10306558 8.92E-111 dispersed
Bda13g00653 Bda-Chr13:7491609 Bda01g00267 Bda-Chr1:27218381 1.45E-72 dispersed
Bda01g01078 Bda-Chr1:45490027 Bda01g00267 Bda-Chr1:27218381 1.27E-155 transposed
Bda03g00321 Bda-Chr3:2745793 Bda01g00267 Bda-Chr1:27218381 6.59E-135 transposed
Bda03g00936 Bda-Chr3:8313653 Bda01g00267 Bda-Chr1:27218381 1.56E-154 transposed
Bda08g01055 Bda-Chr8:22669505 Bda01g00267 Bda-Chr1:27218381 2.01E-87 transposed
Bda11g01254 Bda-Chr11:13159469 Bda01g00267 Bda-Chr1:27218381 4.79E-88 transposed
Bda13g00167 Bda-Chr13:2136918 Bda01g00267 Bda-Chr1:27218381 0 transposed
Bda15g00885 Bda-Chr15:14539865 Bda01g00267 Bda-Chr1:27218381 1.82E-79 transposed
Bda01g00267 Bda-Chr1:27218381 Bda09g00172 Bda-Chr9:2561771 0 wgd
Bda01g00267 Bda-Chr1:27218381 Bda09g01487 Bda-Chr9:46695251 7.51E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69415 PF00069 Pkinase 6.10E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00267 - - mnt:21387384 612.453