Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00267 | ATGCGTTGGATTCCGTGTTCAGGGGACTCGAACCGAAAAGCCATGTCAAAGAAGAAGAAGAAGAAGAAGATGGAACTGCTGATGAACAAAGTTGACCATATCAAACCTACTTCAGATAAGTCAAAGGTGAATTCCTCCTTGAGTGTCAAAGGAACATCTGCAAATGGAGGGTCTAGTCAAATTGCAGCTCAGACATTCACATTTCATGAACTGGCCTCAGCAACTAGAAATTTCAGGGCAGAATGTCTTTTGGGAGAGGGAGGTTTTGGTCGAGTTTATAAAGGACACTTAGGAAACACTAATCAAGTTGTTGCTATTAAGCAACTCGATCGAAACGGGTTGCAAGGAAACCGAGAATTTCTCGTCGAAGTGTTGATGTTGAGTCTTCTACATCATCCTAACCTTGTCAATCTTATAGGGTATTGTGCTGATGGAGATCAGAGGCTGCTGGTTTATGAATATATGTCTCTTGGATCATTGGAGGATCATTTACATGATGTTTTGCCTGGTACAAGAAAGCTGGATTGGAATACAAGAATGAAAATAGCAGCTGGGGCAGCAAAAGGGCTGGAGTACTTACACGACAAGGCCAGTCCTCCAGTAATTTACAGAGATTTGAAGTGTTCAAACATTTTGTTGGGTGAAAACTATCATCCTAAGTTGTCTGATTTCGGGTTAGCAAAAGTAGGTCCTGTTGGAGACAACACCCATGTTTCCACCAGAGTTATGGGTACTTACGGATATTGCGCTCCAGAATATGCTAAAACCGGTCAGTTAACTCTCAAATCAGATGTTTACAGCTTCGGAGTTGTGCTTCTGGAGATCGTCACCGGCCGGAAAGCCATTGATGATACCAAAAAAGCTTCTGGAGAGCAGAATCTTGTTGCATGGGCAAGACCGTTGTTTAAAGATCGAAACAAGCTTTCACAAATGGCGGATCCGGCGCTGAAAGGCCAATACCCATCAAGGGGATTATACCAAGCCATTGCCATTGCAGAAATGTGCGTTCAAGAGCAGCCTCATTTGCGACCCGTCATAGTTGATGTGGTCACTGCCCTCACTTACCTTGCTTTGCAGAGATTCGACCCAAATTCAGAACCAGCTCGAAGCCCTCTTCATCCTTCTCTTACTTCTCCTAGAACCAGCTCTAAGAAAATCAATATCTACGAGAGAAACCCCACCCGGAAATTTGATTGA | 1197 | 43.69 | MRWIPCSGDSNRKAMSKKKKKKKMELLMNKVDHIKPTSDKSKVNSSLSVKGTSANGGSSQIAAQTFTFHELASATRNFRAECLLGEGGFGRVYKGHLGNTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLHDVLPGTRKLDWNTRMKIAAGAAKGLEYLHDKASPPVIYRDLKCSNILLGENYHPKLSDFGLAKVGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIVTGRKAIDDTKKASGEQNLVAWARPLFKDRNKLSQMADPALKGQYPSRGLYQAIAIAEMCVQEQPHLRPVIVDVVTALTYLALQRFDPNSEPARSPLHPSLTSPRTSSKKINIYERNPTRKFD | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 27218381 | 27220512 | - | Bda002212.1 | Bda01g00267 | 267 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00267 | 398 | PANTHER | OS07G0668900 PROTEIN | 1 | 384 | - | - | |
Bda01g00267 | 398 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Bda01g00267 | 398 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 201 | 213 | IPR008271 | GO:0004672|GO:0006468 | |
Bda01g00267 | 398 | MobiDBLite | consensus disorder prediction | 34 | 57 | - | - | |
Bda01g00267 | 398 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 107 | IPR017441 | GO:0005524 | |
Bda01g00267 | 398 | MobiDBLite | consensus disorder prediction | 370 | 388 | - | - | |
Bda01g00267 | 398 | SUPERFAMILY | Protein kinase-like (PK-like) | 64 | 383 | IPR011009 | - | |
Bda01g00267 | 398 | Gene3D | Phosphorylase Kinase; domain 1 | 62 | 154 | - | - | |
Bda01g00267 | 398 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 365 | - | - | |
Bda01g00267 | 398 | Pfam | Protein kinase domain | 82 | 349 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g00267 | 398 | MobiDBLite | consensus disorder prediction | 40 | 57 | - | - | |
Bda01g00267 | 398 | ProSiteProfiles | Protein kinase domain profile. | 78 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g00267 | 398 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED | 1 | 384 | - | - | |
Bda01g00267 | 398 | SMART | serkin_6 | 78 | 356 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g00267 | 398 | CDD | STKc_IRAK | 84 | 354 | - | - | |
Bda01g00267 | 398 | MobiDBLite | consensus disorder prediction | 364 | 398 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00267 | Bda-Chr1:27218381 | Bda14g01130 | Bda-Chr14:10306558 | 8.92E-111 | dispersed | |
Bda13g00653 | Bda-Chr13:7491609 | Bda01g00267 | Bda-Chr1:27218381 | 1.45E-72 | dispersed | |
Bda01g01078 | Bda-Chr1:45490027 | Bda01g00267 | Bda-Chr1:27218381 | 1.27E-155 | transposed | |
Bda03g00321 | Bda-Chr3:2745793 | Bda01g00267 | Bda-Chr1:27218381 | 6.59E-135 | transposed | |
Bda03g00936 | Bda-Chr3:8313653 | Bda01g00267 | Bda-Chr1:27218381 | 1.56E-154 | transposed | |
Bda08g01055 | Bda-Chr8:22669505 | Bda01g00267 | Bda-Chr1:27218381 | 2.01E-87 | transposed | |
Bda11g01254 | Bda-Chr11:13159469 | Bda01g00267 | Bda-Chr1:27218381 | 4.79E-88 | transposed | |
Bda13g00167 | Bda-Chr13:2136918 | Bda01g00267 | Bda-Chr1:27218381 | 0 | transposed | |
Bda15g00885 | Bda-Chr15:14539865 | Bda01g00267 | Bda-Chr1:27218381 | 1.82E-79 | transposed | |
Bda01g00267 | Bda-Chr1:27218381 | Bda09g00172 | Bda-Chr9:2561771 | 0 | wgd | |
Bda01g00267 | Bda-Chr1:27218381 | Bda09g01487 | Bda-Chr9:46695251 | 7.51E-115 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69415 | PF00069 | Pkinase | 6.10E-47 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00267 | - | - | mnt:21387384 | 612.453 |