Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00294 ATGACGGGTAATGGAAAGGTTAGGGCGGAATCTGTCATGGAGGCTGCCATGCTTGCTGCTAATGGACATCCATTCGAAGTCGTTTATTACCCTAGAGCTAGCACACCTGAATTTTGTGTTAGGGCTTCTTCAATGAGAGCAGCAATGCAGATCCGATGGTGCTCTGGAATGAGGTTCAAAATGGCGTTTGAAACTGAGGATTCGTCGAGAATAAGCTGGTTCATGGGGACTATTTCTTCTGTCCAAGTTGCCGATCCAGTGCACTGGCCAGAATCTCCTTGGCGCATTCTCCAGGTAACATGGGATGAGCCAGATCTGCTGCAAAATGTGAAACGGGTTAGCCCGTGGCTTGTAGAGGTGGTATCGAATATGTCGGCAATCAATCTCTCCCCATTCTCACCTCCGAGGAAAAAACCGAGATTGCCAAATCACTCTGAATTCCCTTTCGATGCCACCCTTTTCCCGATGCCAAATGCATTTGCCACTAACAACCACATTCGGCCGAGTGGCCCCTTCGGTTGTCTACCCGACTACTCCCCCCCTGCTGGCATGCAGGGAGCCAGGCATCCTAGTTACGATCAATCCTTCTCGGATCTCCAATTCAACACACTTCACTCCAGCCAATTCCCGGTTGGCCATGTACCACTCAATACCACATCTGCTTTTATGGGAGTAGTCTCGACTAGTACAACGGTTCAAAAGGGCGTCATGGGTAATGGTCTCTCAAGCTTGTTGACAATGGCGGTTTCGAAAAAATCAGATGATTCAAAACCGCCCCAGCTCATGCTTTTTGGCCAAACAATACTGACTGAGCAGCAAATGTCTCAGAGCTCCGGCGAAACCATCTCGCCAGGTCCCACCGGCAACAGTTCATCAGATGGGAACGGAGATAAAGCAGCAAATTTGTCCGATGAGTCGGGGCAGACCCTTTTCAACATTGAAACAGGTCATTGTAAAGTCTTTATGGAATCGGAAGATGTAGGTCGAACAATTGACCTCTCTTTGCTCAGTTCCTATGACGAACTTTGCAAAAAATTGGCGGATTTGTTCGGGATAGAAAATTCAGAGATGTTAAACCATGTGCTCTATAGGGACGGTTCTGGTGCAGTCAAACACATAGGAGATGAGCCATTCAGTGAGTTCATGAAAACCGCGAGGCGAGTGACGATTTTAATGGAATCGGCAAGTGAATAA 1194 47.91 MTGNGKVRAESVMEAAMLAANGHPFEVVYYPRASTPEFCVRASSMRAAMQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPVHWPESPWRILQVTWDEPDLLQNVKRVSPWLVEVVSNMSAINLSPFSPPRKKPRLPNHSEFPFDATLFPMPNAFATNNHIRPSGPFGCLPDYSPPAGMQGARHPSYDQSFSDLQFNTLHSSQFPVGHVPLNTTSAFMGVVSTSTTVQKGVMGNGLSSLLTMAVSKKSDDSKPPQLMLFGQTILTEQQMSQSSGETISPGPTGNSSSDGNGDKAANLSDESGQTLFNIETGHCKVFMESEDVGRTIDLSLLSSYDELCKKLADLFGIENSEMLNHVLYRDGSGAVKHIGDEPFSEFMKTARRVTILMESASE 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27818086 27819657 - Bda002248.1 Bda01g00294 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00294 397 MobiDBLite consensus disorder prediction 273 303 - -
Bda01g00294 397 PANTHER AUXIN RESPONSE FACTOR 2 392 - -
Bda01g00294 397 Gene3D - 52 127 - -
Bda01g00294 397 Pfam Auxin response factor 15 98 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bda01g00294 397 ProSiteProfiles PB1 domain profile. 315 395 IPR000270 GO:0005515
Bda01g00294 397 Gene3D - 312 397 - -
Bda01g00294 397 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 392 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00294 Bda03g00741 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00294 Bda-Chr1:27818086 Bda14g00072 Bda-Chr14:567865 1.26E-66 dispersed
Bda01g00294 Bda-Chr1:27818086 Bda02g00757 Bda-Chr2:48348964 2.27E-135 wgd
Bda01g00294 Bda-Chr1:27818086 Bda03g00741 Bda-Chr3:6302195 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00294 - - sly:101246373 530.02