Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00300 ATGGAGCACGTTAAGGTCGCCGAACATAAGAATGGATCTTCAAAGAACGGTTCACTGGGGAGCCTGTGCAAGAGCCGGGACCCGTTGAACTGGGGGGCTGCGGCGGAGGCTCTTAGTGGGAGCCACTTGGACGAGGTGAAGAGGATGGTTGCTGAGTATCGCCGGCCAGTGATAAATCTCGGAGGGGAAACTTTGACCATCGCGCAGGTGGCTGCCGTTGCCCGGCGGAGCTCGGAAGTATCAGTGGATCTATCGGAATCTGCTAGAGCCGGTGTGAAGGCGAGCAGTGACTGGGTGATGGATAGTATGAACAAAGGGACAGACAGTTACGGAGTTACTACTGGGTTTGGTGCAACTTCGCACAGAAGAACTAAAGAAGGTGGAGCTCTGCAGAAGGAACTGATTAGATTCTTGAACGCTGGAATATTCGGGAACGGGACGGAATCTTGCCACACTTTGTCGCACTCCGCCAGCAGAGCCGCCATGCTAGTAAGAATCAATACCCTCCTCCAAGGATACTCTGGCATCAGATTCGAGATCCTGGAAGCTATAACGAAGCTTCTCAACAGCAACGTCACCCCGTGTTTGCCACTTCGCGGTACCATTACGGCCTCCGGCGACCTCGTCCCTCTCTCCTACATTGCCGGACTACTCACTGGAAGACCCAACTCCAAAGCCGTCGGCCCCGACGGGAAATCGCTCACTGCTACGGAGGCGTTTGAAATCGCCGGGATTAAATCCGGATTTTTCGAGCTGCAGCCGAAGGAAGGGCTGGCCCTGGTCAACGGCACCGCCGTCGGATCTGGGTTGGCTTCGGTGGTGCTTTTTGAGGCAAATATTCTCGCTGTGTTGTCGGAGATTCTCTCCGCGGTCTTCGCCGAGGTGATGCAGGGGAAGCCGGAGTTTACAGACCATTTGACCCATAAATTGAAGCACCATCCTGGTCAAATTGAAGCTGCCGCAATAATGGAGCACATTTTGGACGGAAGTTCTTACATTAAAGCTGCCAAAAAACTCCACGAAACTGATCCTTTGCAGAAACCAAAACAAGATCGGTACGCTCTTAGAACTTCGCCCCAATGGCTCGGCCCGCTAATTGAAGTGATCCGATACTCAACCAAATCGATCGAAAGAGAAATTAACTCTGTTAACGACAACCCTCTGATCGATGTTTCTAGAAACAAAGCCTTGCACGGCGGAAACTTTCAAGGAACCCCAATCGGAGTGTCCATGGATAATACCCGTTTAGCCATTGCTTCTATTGGGAAGCTCATTTTCGCCCAATTTTCTGAATTAGTGAACGATTTCTACAACAATGGGTTGCCCTCCAATCTCTCTGGGGGTAGAAACCCTAGTTTGGATTATGGATTCAAAGGAGCCGAAATCGCCATGGCTTCGTACTGCTCGGAGCTTCAGTACCTCGCAAACCCCGTAACCAGCCATGTCCAAAGTGCAGAGCAACATAATCAAGACGTTAACTCTCTTGGCCTGATATCATCTAGAAAGACAGCTGAATCCGTCGATATTTTGAAATTGATGTCCTCCACTTTCCTGGTTGCTCTTTTTCAAGCGATCGATTTGAGATATTTGGAGGAGAACTTGAAGAACACAGTGAAGAACACAGTCAGTCAAGTTGCTAAGAGGGTTCTAACCACCGGCGCTAACGGACAACTCCACCCATCAAGATTCTGCGAGAAGGACTTACTCAAAGTCGTCGACAGAGAATATGTTTTCGCTTACATCGACGACCCCTGCAGTGCAAATTACCCATTGATGCAAAAGCTAAGACAAGTTCTCGTGGAGCACGCCCTCACCAACGGAGAAGGCGAGAAGAACGTAAGCACTTCGATCTTTCAAAAAATCACTGCATTTGAGGAGGAGCTGCTGGCGATCCTGCCGAAAGAAGTTGAAGCGACGAGGGTGGCAGTCGAAAGCGGAAACGCCGCCATTGGGAACCAGATAAAGAGCTGCAGATCGTACCCATTGTATAAGTTCGCGAGGGAAGAGCTGGGAACAGGGCTGCTGACGGGGGAGAAGGTGAAGTCCCCGGGAGAAGAATGCGACGTGGTATTCACAGCAATGTGCGAGGGCAAACTCATCGACCCTATTCTGGCCTGCTTAAGCGACTGGAATGGCGCTCCAATCCCCATTTGCTAG 2157 50.86 MEHVKVAEHKNGSSKNGSLGSLCKSRDPLNWGAAAEALSGSHLDEVKRMVAEYRRPVINLGGETLTIAQVAAVARRSSEVSVDLSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLSHSASRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPDGKSLTATEAFEIAGIKSGFFELQPKEGLALVNGTAVGSGLASVVLFEANILAVLSEILSAVFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHETDPLQKPKQDRYALRTSPQWLGPLIEVIRYSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAESVDILKLMSSTFLVALFQAIDLRYLEENLKNTVKNTVSQVAKRVLTTGANGQLHPSRFCEKDLLKVVDREYVFAYIDDPCSANYPLMQKLRQVLVEHALTNGEGEKNVSTSIFQKITAFEEELLAILPKEVEATRVAVESGNAAIGNQIKSCRSYPLYKFAREELGTGLLTGEKVKSPGEECDVVFTAMCEGKLIDPILACLSDWNGAPIPIC 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27933815 27936444 + Bda002257.1 Bda01g00300 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00300 718 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 200 216 IPR022313 GO:0016841
Bda01g00300 718 Pfam Aromatic amino acid lyase 65 540 IPR001106 -
Bda01g00300 718 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 27 707 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bda01g00300 718 Gene3D - 20 264 IPR024083 -
Bda01g00300 718 MobiDBLite consensus disorder prediction 1 21 - -
Bda01g00300 718 CDD PAL-HAL 63 528 IPR001106 -
Bda01g00300 718 Gene3D Fumarase/aspartase (Central domain) 265 713 - -
Bda01g00300 718 SUPERFAMILY L-aspartase-like 27 718 IPR008948 GO:0003824
Bda01g00300 718 Gene3D - 531 652 IPR023144 -
Bda01g00300 718 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 23 718 - -
Bda01g00300 718 PANTHER HISTIDINE AMMONIA-LYASE 23 718 IPR001106 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00300 Bda03g00739 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00300 Bda-Chr1:27933815 Bda03g00739 Bda-Chr3:6273362 0 dispersed
Bda01g00298 Bda-Chr1:27905124 Bda01g00300 Bda-Chr1:27933815 3.73E-12 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00300 K10775 - zju:107433056 1237.25