Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00315 | ATGCCTTTCCACAATTTCGCATTCGGCACGCAGGAGGAGTTCGTCCGACCGCAGCTATGGAAGTGCGGCGTGGCGGAGTTTATTTCCACGCTGATCTTCGTCTTTGCCGGCCAGGGATCAGGAATGGCATTTGCCAAGATATCGAATAATGGCGCCACCACTGAAGCCTCAATAATCGCCGCCTCTCTCGCCCACGGTTTCGGTCTCTTCATTGGCGTCGCCGTCAGCTTTAACATTTCCGGTGGGCATGTTAATCCTGCAGTCACCTTTGGTGCATTCGTGGGCGGAAACATTACTCTCCTCCGCCTCATTGTTTACTGGATCGGTCAGCTTCTCGGCTCTGTCGCTGCATGTGGTCTTCTTAAATTCACCACCCACGGCATGGTTACGACACCCTTTTTGTTCGCCTCTGATATTACAGTCTGGAACGCATTCGTTTTCGAGATCGTCATGACTTTCGGTCTGGTCTATACAGTCTATGCCACAGCAATTGATCCAAACAAAGGAACTTTAAAGACGATTGCGCCTATCGCTATCGGCTTAGTCGTTGGCGCTAATGTTCTGGCCGGTGGAGCCTTTGAGGGGGCGTCGATGAACCCGGCCGTCTCATTTGGACCCGCTTTGGTGAGCTGGAGTTGGGACCACCAGTGGGTCTACTGGGCCGGACCCCTCATCGGCGGCGGCATCGCCGGCCTTGTTTTCGAGGGTTTTTTTATCAAGCAGACCCACGACCCTCTACCTCAGGAATTCTGA | 753 | 53.52 | MPFHNFAFGTQEEFVRPQLWKCGVAEFISTLIFVFAGQGSGMAFAKISNNGATTEASIIAASLAHGFGLFIGVAVSFNISGGHVNPAVTFGAFVGGNITLLRLIVYWIGQLLGSVAACGLLKFTTHGMVTTPFLFASDITVWNAFVFEIVMTFGLVYTVYATAIDPNKGTLKTIAPIAIGLVVGANVLAGGAFEGASMNPAVSFGPALVSWSWDHQWVYWAGPLIGGGIAGLVFEGFFIKQTHDPLPQEF | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 28262176 | 28263082 | - | Bda002279.1 | Bda01g00315 | 315 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00315 | 250 | PANTHER | AQUAPORIN-8 | 1 | 248 | IPR034294 | - | |
Bda01g00315 | 250 | Pfam | Major intrinsic protein | 15 | 234 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda01g00315 | 250 | Gene3D | Glycerol uptake facilitator protein. | 4 | 248 | IPR023271 | - | |
Bda01g00315 | 250 | PANTHER | AQUAPORIN TIP1-1 | 1 | 248 | - | - | |
Bda01g00315 | 250 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda01g00315 | 250 | PRINTS | Major intrinsic protein family signature | 147 | 165 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda01g00315 | 250 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda01g00315 | 250 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda01g00315 | 250 | PRINTS | Major intrinsic protein family signature | 180 | 202 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda01g00315 | 250 | PRINTS | Major intrinsic protein family signature | 217 | 237 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda01g00315 | 250 | CDD | MIP | 24 | 235 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bda01g00315 | 250 | SUPERFAMILY | Aquaporin-like | 13 | 246 | IPR023271 | - | |
Bda01g00315 | 250 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00315 | Bda-Chr1:28262176 | Bda07g00601 | Bda-Chr7:7353841 | 5.83E-121 | dispersed | |
Bda03g00723 | Bda-Chr3:6106560 | Bda01g00315 | Bda-Chr1:28262176 | 5.66E-161 | transposed | |
Bda01g00315 | Bda-Chr1:28262176 | Bda05g01212 | Bda-Chr5:60068461 | 8.16E-120 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00315 | K09873 | - | ncol:116253503 | 356.295 |