Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00338 ATGGGGATTCCTCAGGCGATGGAAATCCTGAGCGAAAGAGCAGCTTTTATTAGAGACTCGCTGCAAAAGAGCCAAACTATCACCAATAACATGGTCGACATTCTTGGCTCCTTTGACCACCGCCTCTCCGCCCTTGAAACCGCCATGCGTCCCACTCAGATAAGAACGCACTCAATCAGGAAGGCTCATGAGAATATTGATAAAACGGTCAAGGCTGCAGAGGTTATATTAGCGCAGTTCGACTTGTCTCGGAAGGCAGAGGCTAAAATATTAAGAGGGCCGCATGAGGATCTTGAAAGTTACTTGGAAGCCATTGACCAACTGAGAAGCATTATTCGCTTTTTTGGTGGCAATAAAAATTTTAAGAGTAGTGATTCAGTGCTTAACCACACAAACAACTTGCTTGCAAAAGCTATTTCTAAGCTTGAAGATGAATTCAGGCAGCTTCTGACGAACTACAGTAAGCCTGTTGAACCTGATCGTCTATTTGATTGCCTTCCCAACTCTCTACGTCCATCATCAGAAACATCGGGGCATCAAAGCAATGCTACTAGCAAGGGTAGTTCTATGCACCAAAGTAAAAGATTGGAAACTGCTGTGTATACACCCCTGTCATTAATTCCTAATAGAGTTGTGCCGCTATTGCATGACTTAGCCCAGCAAATGGTTCAGGCTGGCCATCAACAACAGCTGCTGAGGATATACAGGGATACTCGTGCTTCGGTTTTGGAACAGAGTCTCAGAAAACTAGGCGTGGAGAGGCTTAGTAAAGACGATGTCCAGAAAATGCAGTGGGAGGCTTTAGAGGCTAAGATTGGGAATTGGATTCATCACATGCGTATTGCGGTCAAGCTGTTGTTGTCAGGGGAAAGGAAAATATGCGATCAAATATTTGAGGGTGTTGATTCTCTCAGGGATCAATGCTTTGCGGAAGTGACTGCAAACAGTGTGGCTGTGTTGCTAAGTTTTGGAGAGGCAATTGCCAAAAGCAAGAGATCGCCAGAAAAACTATTTGTTCTCTTAGACATGTATGAGATAATGAGGGAACTACAATCAGAGATTGAAACACTGTTTGGCAACAAAGCAAGCCATGAAATGAGGGAAGCTGCATTGAGTTTGACAAAACGTCTCGCTCAGACAGCCCAGGAAACTTTCGCTGACTTTGAAGAAGCAGTAGAAAAGGATGCAACAAAAACTGCTATTCTTGATGGAACTGTCCATCCCTTGACCAGCTATGTGATAAATTATGTGAAATTTTTATTCGATTATCAGTCCACTTTGAAGCTACTTTTTGAAGACTTTGATAATAGTGATCCAGATGTTCAGTTAGCAAAGGTAACTACAAGGATTATGCTTGGTCTTCTTAATAATCTGGATGCGAAATCTAAGCAGTATAAAGACCAGGCATTGACTCAATTATTTCTCATGAACAACATTCACTATATAGTGAGATCTGTGAGAAGGTTTGTTATTGTATTGTGCTTGCTCCATTTGAAAGAAAAGACCTTACCTGCTTCGATATTTACCGTTTTAATGTTGTACAGGTCAGAGGCAAAGGATGTGTTGGGAGATGATTGGGTACAAATACACCGAAGAATTGTCCAACAACATGCTAATCAGTACAAGAGAGTTTCCTGGGCAAAGATTTTGCAGTGCCTCACTATTCAGGGCCTAAATCAGTCGGGCGGAGGCGATGCGGGCAGCAGTGGACTTTCAAGAGCAATGGTGAAAGAAAGGTTCAAGACATTTAATATTCAATTTGAAGAGCTTCATCAAAGACAGTCTCAGTGGACAGTTCCCGATAGCGAGTTGCGCGAATCGTTGAGGCTGGCCGTCGCTGAAGTCCTCTTGCCTGCATACAGATCTTTCGTCAAACGTTTCGGGCCAATGATAGAGAATGGGAAGAATCCTCAGAAATACATCAGATACACTCCTGAGAATCTTGAACGGATGTTGAATGACTTTTTTGAGGGTAAAACATTTGGTGAACAGAAACGG 1998 42.79 MGIPQAMEILSERAAFIRDSLQKSQTITNNMVDILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTVKAAEVILAQFDLSRKAEAKILRGPHEDLESYLEAIDQLRSIIRFFGGNKNFKSSDSVLNHTNNLLAKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSETSGHQSNATSKGSSMHQSKRLETAVYTPLSLIPNRVVPLLHDLAQQMVQAGHQQQLLRIYRDTRASVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHHMRIAVKLLLSGERKICDQIFEGVDSLRDQCFAEVTANSVAVLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQSEIETLFGNKASHEMREAALSLTKRLAQTAQETFADFEEAVEKDATKTAILDGTVHPLTSYVINYVKFLFDYQSTLKLLFEDFDNSDPDVQLAKVTTRIMLGLLNNLDAKSKQYKDQALTQLFLMNNIHYIVRSVRRFVIVLCLLHLKEKTLPASIFTVLMLYRSEAKDVLGDDWVQIHRRIVQQHANQYKRVSWAKILQCLTIQGLNQSGGGDAGSSGLSRAMVKERFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPMIENGKNPQKYIRYTPENLERMLNDFFEGKTFGEQKR 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 28985615 28990765 - Bda032891 Bda01g00338 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00338 666 MobiDBLite consensus disorder prediction 169 194 - -
Bda01g00338 666 Coils Coil 347 367 - -
Bda01g00338 666 Gene3D Exocyst complex component Exo70 74 497 - -
Bda01g00338 666 Coils Coil 132 152 - -
Bda01g00338 666 SUPERFAMILY Cullin repeat-like 76 657 IPR016159 -
Bda01g00338 666 Pfam Exo70 exocyst complex subunit 274 654 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bda01g00338 666 MobiDBLite consensus disorder prediction 164 194 - -
Bda01g00338 666 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 488 - -
Bda01g00338 666 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 512 663 - -
Bda01g00338 666 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 488 IPR004140 GO:0000145|GO:0006887
Bda01g00338 666 PANTHER EXOCYST COMPLEX PROTEIN EXO70 512 663 IPR004140 GO:0000145|GO:0006887
Bda01g00338 666 Gene3D Exocyst complex component Exo70 507 666 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00338 Bda-Chr1:28985615 Bda15g00126 Bda-Chr15:3666648 0 dispersed
Bda01g01624 Bda-Chr1:52131909 Bda01g00338 Bda-Chr1:28985615 4.60E-24 transposed
Bda01g00338 Bda-Chr1:28985615 Bda01g00434 Bda-Chr1:31203404 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00338 K07195 - mnt:21385810 1050.43