Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda01g00355 | ATGGGAACAGTGAGCGTCTACTTAATCTTATCACTTATAGTCTCCATGGTCTGCATCGTTCAACCGCTGGCAGTCGGACCCAGATTGCTCCTGCTAATATTAGACGCTGTAGCTCTAACTCTAGTTACAGCTGCCGCGGGCGCCGGCGCTGCTATAGACTATCTCGCTCACAACGGCAATTCTAATGCAAACTGGCTCGCCATCTGCAATCAATTCGGAGATTTCTGTCAAAAAGCGAGCGGAGCTGTGGTGGCTTCCTTCGTGTCAATTGTCATCTTCATTTTTCTTGTTTTGTTTTCTGCTTTGGCTCTCAAAAAGCCATAA | 324 | 47.22 | MGTVSVYLILSLIVSMVCIVQPLAVGPRLLLLILDAVALTLVTAAAGAGAAIDYLAHNGNSNANWLAICNQFGDFCQKASGAVVASFVSIVIFIFLVLFSALALKKP | 107 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 29328096 | 29328595 | - | Bda002329.1 | Bda01g00355 | 355 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda01g00355 | 107 | PANTHER | CASP-LIKE PROTEIN | 1 | 106 | - | - | |
| Bda01g00355 | 107 | Pfam | Casparian strip membrane protein domain | 2 | 91 | IPR006702 | - | |
| Bda01g00355 | 107 | PANTHER | NITRATE, FORMATE, IRON DEHYDROGENASE | 1 | 106 | - | - | |
| Bda01g00355 | 107 | TIGRFAM | A_tha_TIGR01569: plant integral membrane protein TIGR01569 | 3 | 103 | IPR006459 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda01g00355 | Bda05g01146 | CCT | |
| Bda01g00355 | Bda03g01654 | CCT | |
| Bda01g00355 | Bda05g01146 | ECH | |
| Bda01g00355 | Bda03g01654 | ECH | |
| Bda01g00355 | Bda03g00715 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00355 | Bda-Chr1:29328096 | Bda12g00166 | Bda-Chr12:1580130 | 1.14E-18 | dispersed | |
| Bda01g00355 | Bda-Chr1:29328096 | Bda03g01654 | Bda-Chr3:55870139 | 2.20E-44 | wgd | |
| Bda01g00355 | Bda-Chr1:29328096 | Bda05g01146 | Bda-Chr5:59642321 | 6.87E-43 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda01g00355 | - | - | qsu:111996797 | 106.686 |