Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00372 ATGCGGGTCTTCTTCTCTCATCTGGGGGCTTTGGCTTTTTTGGTTCTGCCCCTTTCGGTGGTTTACTGCGGCTTTCCTGCTGCGCTTCTTTCTCTTGAGAGAGCCTTCCCACCGACTCAACGAGTCGAATTCGACGATCTCGTAGCCCGTGACCGAGTCAGACACGGTCGTTTCTTGCAAGGTGTTGCGGGTGGTGTAGTCGACTTCTCTGTACAAGGTTCTTCTGATCCGTATTTGGTCGGGCTTTATTACACAAAAGTAAAGTTGGGAACTCCTCCAAGGGAATTCACTGTGCAGATTGATACTGGAAGTGATATTTTGTGGATCACCTGTAATTCGTGCAGCGATTGTCCTCAATCGAGTGCACTTGGGATTCAACTCAATTTCTTCGATGCGGCTAGTTCGTTTACTGCTGGCCTAATCCCCTGTTCGGACCCCATGTGTTCTTCATTTCCAACATCGGCCATTCAATGCGTTTCTCAAAGTAATCAATGTGGTTACAGCTTCCAGTATGGCGATGGAAGTGGAACATCCGGGTTTTACGTATCAGATTCTTTGTATTTTGACATGGTTTTGACGGAGTCTATAGTGGTCAACTCTTCGGCTCCCATTGTATTCGGGTGTAGCACTTATCAGACTGGGGATTTGACCAAAACAGATAAAGCAGTCGATGGAATCTTTGGTTTTGGTCGAGGCTTTTTGTCTGTTATATCGCAGCTGTCGTCTCGAGGCATAACGCCCAAAGTATTCTCCCATTGTCTGAAAGGAAACGGCAACGGAGGGGGTATATTGGTTCTCGGCGAGATTTTGGACCCGGCCATTGTTTATACTCCACTTGTTCCGTCACAGCCGCATTATAATTTATATTTGCAAAATATTGCTGTAAATGGTCAGCCATTGCCAATTGATCCAACTATGTTTGCTACGTCAAATAATAGAGGAACTATTGTAGATTCCGGAACAACCTTAGCATACCTTGTCAAAGATGCATATGATGTGCTCGTCGACAGTATAACTGCTATAGTTTCTCAGTCTGCACCTTCTTACATTAATAAAGGATATCAGTGTTATTTAGTCTCTACCAGCCCCGTCGAAAATTTTCCCATCATTAGCTTAAACTTTATGGGTGGTGCCTCCCTCTTGTTAAAACCGGAAGAGTATCTTGTGAATTTCGGTCTCACCGGAGGAGCAACATTGTGGTGCCTTGGGTTTCAGAAAGCTCAAGAGGGTTTAACAATTTTAGGAGATATTGTTCTGAAAGACAAGATCTTTGTCTATGATTTAGCTCGCGGACGGATCGGATGGGCCAACTACGATTGTTCGATGTCAGTGAATGTTTCTGTAACCTCAGGTAAAGACGAGTTTGTCGCCGGACAGCTCAGCTTTAGCAGCTCGACAAGAGATGGCCGTTTTGATCTATTACTGATCATCGTCTTGGGTCGCCTAATCCTTTCCATTTGGTAA 1464 44.95 MRVFFSHLGALAFLVLPLSVVYCGFPAALLSLERAFPPTQRVEFDDLVARDRVRHGRFLQGVAGGVVDFSVQGSSDPYLVGLYYTKVKLGTPPREFTVQIDTGSDILWITCNSCSDCPQSSALGIQLNFFDAASSFTAGLIPCSDPMCSSFPTSAIQCVSQSNQCGYSFQYGDGSGTSGFYVSDSLYFDMVLTESIVVNSSAPIVFGCSTYQTGDLTKTDKAVDGIFGFGRGFLSVISQLSSRGITPKVFSHCLKGNGNGGGILVLGEILDPAIVYTPLVPSQPHYNLYLQNIAVNGQPLPIDPTMFATSNNRGTIVDSGTTLAYLVKDAYDVLVDSITAIVSQSAPSYINKGYQCYLVSTSPVENFPIISLNFMGGASLLLKPEEYLVNFGLTGGATLWCLGFQKAQEGLTILGDIVLKDKIFVYDLARGRIGWANYDCSMSVNVSVTSGKDEFVAGQLSFSSSTRDGRFDLLLIIVLGRLILSIW 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29588154 29591127 + Bda002350.1 Bda01g00372 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00372 487 CDD pepsin_A_like_plant 83 440 IPR034161 -
Bda01g00372 487 Pfam Xylanase inhibitor N-terminal 83 267 IPR032861 -
Bda01g00372 487 SUPERFAMILY Acid proteases 78 444 IPR021109 -
Bda01g00372 487 Gene3D Acid Proteases 67 268 IPR021109 -
Bda01g00372 487 Pfam Xylanase inhibitor C-terminal 285 436 IPR032799 -
Bda01g00372 487 Gene3D Acid Proteases 270 447 IPR021109 -
Bda01g00372 487 PANTHER ASPARTYL PROTEASES 8 457 IPR001461 GO:0004190|GO:0006508
Bda01g00372 487 PRINTS Pepsin (A1) aspartic protease family signature 412 427 IPR001461 GO:0004190|GO:0006508
Bda01g00372 487 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Bda01g00372 487 PRINTS Pepsin (A1) aspartic protease family signature 315 326 IPR001461 GO:0004190|GO:0006508
Bda01g00372 487 ProSiteProfiles Peptidase family A1 domain profile. 83 436 IPR033121 -
Bda01g00372 487 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 457 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00372 Bda05g01201 CCT
Bda01g00372 Bda05g01201 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00372 Bda-Chr1:29588154 Bda05g01201 Bda-Chr5:60003121 0 dispersed
Bda01g00372 Bda-Chr1:29588154 Bda02g00705 Bda-Chr2:47907159 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00372 - - jre:109008469 695.656