Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00375 ATGGGGTTTTGTGTGTTCTTTGTTCTTCTTCTGGTTTCCTCATCTGCAGAAGGAGACCCTCTTGTTCCAGCTCTTTTCATCTTCGGGGACTCTGTGGTTGATGTCGGAAATAACAACTATTTGCATACGCTTGTCAAGGCTAACTTTCTTCCTTATGGTAGAGACTTCGTTTCCCACCGACCAACTGGAAGGTTCTGCAATGGGAAGCTGGCGACGGACTTCACTGCTGAATATCTGGGTTTCACATCATACCCACCAGCATACCTTAGCCGTGAGGCAGCCGGCGAAGCCCTCTTAACCGGAGTCAACTTTGCCTCTGCTGCCTCTGGCTACTATGAAAGCACTGCCCGGTTATATCAATCACTTCCGCTGAGCCGGCAGTTGAACAACTACAAGCAATACCAGAACGAGTTGGTGAATATGGTAGGAAGAAGCAAAGCCAACGCTATATTTTCTGATGCAATTTATCTTCTCAGCGCTGGAAGCAGTGATTTTATTCAGAATTATTATGTCAACCCATTGCTTAGAGGAAACTACTCGCCTGATAAGTTTTCTGAACTTCTAGTCACATCCTTCTCCGATTTCATCCAGAATGTATATGATCTTGGAGGAAGAAGAATAGGGGTGACTAGTTTACCACCAACGGGGTGTTTACCGGCAGCCATTACACTTTTCGGGCGAGGAAGGAACAGTTGCGTAGATAGGTTAAACCAAGACGCTATCTCATTCAACAATAAGCTAAACGACACCTCTGAGGGCTTGAAGACCAGATTTCCCGACCTTAAACTTGTAGTCTTCGACATTTACAACCCGCTCCTAGATATGATAAAAAAGCCTGCTGATTTTGGGTTCTTTGAATCAAGAAGAGCATGTTGTGGGACGGGAATCCTAGAAACTTCCATTCTCTGCAACAGACTATCAATAGGGACATGTTCAAATGCTACAGGCTATGTTTTCTGGGACGGAGTTCATCCATCTGAAGCTGCTAATGAAGTCTTGGCTGGTTCTCTTCTTGCTCAAGGATTTGACCTAATCTCTTAA 1041 44.86 MGFCVFFVLLLVSSSAEGDPLVPALFIFGDSVVDVGNNNYLHTLVKANFLPYGRDFVSHRPTGRFCNGKLATDFTAEYLGFTSYPPAYLSREAAGEALLTGVNFASAASGYYESTARLYQSLPLSRQLNNYKQYQNELVNMVGRSKANAIFSDAIYLLSAGSSDFIQNYYVNPLLRGNYSPDKFSELLVTSFSDFIQNVYDLGGRRIGVTSLPPTGCLPAAITLFGRGRNSCVDRLNQDAISFNNKLNDTSEGLKTRFPDLKLVVFDIYNPLLDMIKKPADFGFFESRRACCGTGILETSILCNRLSIGTCSNATGYVFWDGVHPSEAANEVLAGSLLAQGFDLIS 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29605310 29606923 + Bda002353.1 Bda01g00375 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00375 346 Pfam GDSL-like Lipase/Acylhydrolase 25 334 IPR001087 GO:0016788
Bda01g00375 346 SUPERFAMILY SGNH hydrolase 25 338 - -
Bda01g00375 346 Gene3D SGNH hydrolase 14 341 IPR036514 -
Bda01g00375 346 PANTHER GDSL-MOTIF LIPASE 5 345 - -
Bda01g00375 346 PANTHER GDSL ESTERASE/LIPASE EXL3 5 345 - -
Bda01g00375 346 CDD SGNH_plant_lipase_like 23 338 IPR035669 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00375 Bda-Chr1:29605310 Bda12g01084 Bda-Chr12:42551475 9.10E-138 dispersed
Bda01g00375 Bda-Chr1:29605310 Bda12g01089 Bda-Chr12:42628443 2.78E-138 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00375 - - pop:18100093 535.028