Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00376 AAGAGAAAGTCGATCAAGATAGAGAGAATTGAAGCAGGCCTTAGAAGAGCTAGAGCTGCTATAACAGCAGCTAAAAATGGAAACCAAACCCATGATCCTGATTACATCCCTGTCGGACCGATGTACAGGAATGCTAATGCATTTCACAGGAGCTATTTGGAAATGGAAAATGAGTTCAAGGTGTTTGTTTACGAAGAAGGGGAGCCGCCATTGTTCCACAACGGACCATGCAAGAGCATATATTCAACTGAGGGGAACTTCATCAATGGAATCGAAGTGAATAATCAGTTCAGGACCAGGGATCCTGAAAGGGCTCATGTTTTTTTCCTTCCCTTCAGCGTAGCCATGCTCGTTCAGTTTGTCTACGTCCGTGACTCCCGAGATTTCGGCCCCATCAAACACACCGTCACTGATTATATTGACGTCATCGGACGGAAATATCCCTTCTGGAACCGGAGCCTCGGAGCAGACCATTTCATGGTTTCTTGCCATGACTGGGGGCCAGAAGCTTCGTTTTCAGTGCCTAATCTGGGAAAAAACTCCATTAGAGTCCTCTGCAACGCCAACACTTCAGAAGGATTCAACCCCTTAAAGGACGTTTCCTTCCCGGAGATCAATCTTCAAGCAGGGTCACTAAAGGGAATAATCGGAGGGCCTTCACCGTCCAGCCGCCCGGTCCTCGCCTTCTTCGCCGGCGGCCTTCACGGACCCATCAGGCCCATTCTCATAAACCACTGGGAGAACAAGGACGACGACATTAAAGTCCACCAATATCTTCCCAAAGAAGTTTCTTACTATGAAATGATGAGAAAGAGCAGATTTTGCATCTGCCCCAGTGGATACGAGGTTGCCAGTCCCAGAATCGTAGAAGCCATTTACACCGGATGTGTCCCTGTTCTTATATCCGACCACTACGTTCCTCCGTTCAGCGACGTTCTGAACTGGAAATCGTTCTCCGTTGAAGTTCCGGTGAGGGAGATTCCGAATTTGAAGCAGATACTGCTGAGTATTTCTAGCAGACAGTACATCAGAATGCAGAGGAGGGTTGAGAAAGTGAGGAGGCATTTTGAGTTGAATTCTCCTCCCAAGAGATTTGACGTGTTTCACATGATTCTGCATTCTGTGTGGCTTCGAAGACTCAATCTCAGGGTCGACGAACACGATGAGGTTTAA 1173 47.57 KRKSIKIERIEAGLRRARAAITAAKNGNQTHDPDYIPVGPMYRNANAFHRSYLEMENEFKVFVYEEGEPPLFHNGPCKSIYSTEGNFINGIEVNNQFRTRDPERAHVFFLPFSVAMLVQFVYVRDSRDFGPIKHTVTDYIDVIGRKYPFWNRSLGADHFMVSCHDWGPEASFSVPNLGKNSIRVLCNANTSEGFNPLKDVSFPEINLQAGSLKGIIGGPSPSSRPVLAFFAGGLHGPIRPILINHWENKDDDIKVHQYLPKEVSYYEMMRKSRFCICPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVPVREIPNLKQILLSISSRQYIRMQRRVEKVRRHFELNSPPKRFDVFHMILHSVWLRRLNLRVDEHDEV 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29632740 29634161 + Bda002354.1 Bda01g00376 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00376 390 Gene3D Glycogen Phosphorylase B; 222 360 - -
Bda01g00376 390 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 1 385 IPR004263 GO:0006486|GO:0016757
Bda01g00376 390 PANTHER EXOSTOSIN FAMILY PROTEIN 1 385 - -
Bda01g00376 390 Pfam Exostosin family 56 335 IPR040911 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00376 Bda03g00693 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00376 Bda-Chr1:29632740 Bda07g00046 Bda-Chr7:753764 1.43E-123 dispersed
Bda14g01319 Bda-Chr14:14776147 Bda01g00376 Bda-Chr1:29632740 8.06E-84 dispersed
Bda01g01958 Bda-Chr1:55976728 Bda01g00376 Bda-Chr1:29632740 2.88E-125 transposed
Bda01g00376 Bda-Chr1:29632740 Bda03g00693 Bda-Chr3:5907533 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00376 - - gmx:100806278 674.47