Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00381 ATGTACAGAATGGATATGGCGGCAAAGGGGAAGCTGCTTTACCAAATATATCGAGCTCTTACCTATGGTCTTTCACCTCTCCTATACCTTCACTTACATTGGAGAAGAATTCGAGGCCTTGAGCATTCACTCCGCTGGCCTGAGCGCCTTGGCCGCCCTTCTCTTCCTCGTCCTCCTGGTCCGCTACTCTGGTTTCACGCCGTCTCCTTAGGTGAAGGTATGGCTACTATTTCTGTAGTCAAGCAGTGTATCCAGCGGAGACCTGATTTGAACATTTTGATGACAACTACAACAACGTCTGCATTTGAAGTGATAAGAGATCTCCTTCCATCTGGGGTCATTTACCAGTTTGCCCCAATTGATACCCCTACCGCTGTGGACACCTTCATTAGCCATTGGAGGCCTAATGTGATTGTTATTATGGAGAGCGAACTTTGGCCAAATCTTCTATTGAGTGCATCAAAATGTAAGATTAATCTAGCACTATTAAATGCTCGAGTTTCTGCTAGATCATTCAAATTGTGGTCAGGAGTTATGCTTCTTCCACTGATATCTTTGATGCTGTCAAAGTTTTCATTGATTGTTCCTATGAGCAACTTGCAGGCAGTTCAATTTCAGCTGTTGCAGGCCCCACCTCATATAATCAACTTCTCTGGTGACCTTAAATTTGCAGTTGAAACTTCTGGTATTTCTGAGAAACAGGGAGAAATTGTAGAAGATCTGAGGCTACAGTTGACTCAAAGACAGGTTTGGATGGCTTCTTCAATACACAGGGGTGAAGAGAAAGTTATGCTCGGAGTTCACAATATGCTTTTGAAAGTACATCCTAATTTGCTGACTATTATTGTGCCTCGACATCCACAGCATGGAAAAGAGATTGCTCAAAAATTGGAGAATGATGGTCAACATGTAGCTTTGAGGTCTCAAAATAAAAAGCTAGGACCAGGAAACAATATCTATGTGGTGGACACACTAGGTGAACTAAGATATCTGTATATGTTAACTCCTGTCGCTGTAGTGGGAGGATCATTCTTGCGTGGTCTAGCTGGTCACAACGTGTCAGAAGCAGCTGCAGCTGGATGTGCTGTTTTGACTGGTCCTCATCTGGGGCACTTCTCACACATGGTCCGTGAAATGCTGAGAGTTAATCATTTGTCAGTTCTGCAGGTTCATGGAGAACCAGATCTTGGGTATTGTCTTAACGAGCTTCTCGATGATGCCAAAGTTCTTGAAGCACATCGCAGGGCGGCAAAGCAAGCACATCAATCTCTTGCGAGAGGAATCATTGCCAGAGTTTGGAATTTATTAAATTCTCATGTTTTGGGGCGGATAGTGACATAA 1341 43.7 MYRMDMAAKGKLLYQIYRALTYGLSPLLYLHLHWRRIRGLEHSLRWPERLGRPSLPRPPGPLLWFHAVSLGEGMATISVVKQCIQRRPDLNILMTTTTTSAFEVIRDLLPSGVIYQFAPIDTPTAVDTFISHWRPNVIVIMESELWPNLLLSASKCKINLALLNARVSARSFKLWSGVMLLPLISLMLSKFSLIVPMSNLQAVQFQLLQAPPHIINFSGDLKFAVETSGISEKQGEIVEDLRLQLTQRQVWMASSIHRGEEKVMLGVHNMLLKVHPNLLTIIVPRHPQHGKEIAQKLENDGQHVALRSQNKKLGPGNNIYVVDTLGELRYLYMLTPVAVVGGSFLRGLAGHNVSEAAAAGCAVLTGPHLGHFSHMVREMLRVNHLSVLQVHGEPDLGYCLNELLDDAKVLEAHRRAAKQAHQSLARGIIARVWNLLNSHVLGRIVT 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29686220 29690700 - Bda002360.1 Bda01g00381 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00381 446 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 11 441 IPR039901 GO:0016740
Bda01g00381 446 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 125 432 - -
Bda01g00381 446 Pfam 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 45 224 IPR007507 -
Bda01g00381 446 Coils Coil 400 420 - -
Bda01g00381 446 Gene3D - 43 223 IPR038107 -
Bda01g00381 446 Gene3D Glycogen Phosphorylase B; 232 422 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00381 Bda-Chr1:29686220 Bda13g00884 Bda-Chr13:10465976 4.07E-67 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00381 K02527 - csv:101207342 602.823