Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00389 ATGGGTTCATTCACTCGAACTTGTGAGATTGTAGAAGCCAAGGAAGAGGCAGACTTTGTACAACATAATAATGTGAGATCTTCTCGATCAAATTACAAGATGAGCGGCAAAGATTGCTCACTACCTGCTATGAATTTAGGTTATAAAGATTTTCTGAAGAATGACATCAATAAACTTTTTGCCGCAATTGATCTCAAGCAATCTAAGAGTTTCGACCTTTCACAGCTAACCACTGGCCCAATGAGAAAAAGTACCTTAAAAATGGCAGTTACAACAGGAGTGTCTCGTTCACCAGGAACAGAAATAGTTGAAACAGTGAACTTGAAGCAAGCATTAAGGGAGTTATCCCTTACAAAGGCGTCAGAAATGGCTGCTATGAAACGGCTATCAAAGTTAGCCAGCTCTTCAAGAGCCTCAGAAGCTGGACGAATTAAAACATTGTACAACTCAGTTGTTATTGAAGCCAGTTATTCTAGCCCACCATTCAATGATACAAAAACAAGTGTGGTCCAAAAGTCACTGGAGATGGAGCAAAGCACGTCAAAATCCAAGAAGATTTTGGACGATGTTCAAGTGCCTGTAGTCAAACTATCAAGCAAAAATGCTCATTCTTCTCCTCGATTAGCTTGTATGACAACACAGCATGATACGGAGATGACTCATGAGAGAAATGACGGTGTGTCTGGGCCAAGGAAAGTTGGGACTCAAACGAACAAGTTTACACAGAAAGAGAAACATTCGTTAACTCCATCTTGTTCAAACTCTACTGTTTACATGGGAGAGGAGAATAAAAGCATTCATTCTTCGAGCAAAGCAGTAAACAAAGTGTCAACATTAAAGCCAGTTCGGAAAGGCAGGTTGCAAACTGCACCCTCATCTAATCTGGTAAAAGGAAACAGGGTAGGAAAGTCATCTAGGACTACTGCCAGGCCTATCAAACCAGTTATCAGAAACAAGGGAATTTCTAAGAAAAAAGTGAAAGAAGACACAAGTGGAGCTAAATATACTCCTAGTACATATAACGAAGTAAATGGGGATGCAAATTCTAATACAAGACAGTTGATATGTGAAAGGTGCCAATGTACTCTTAATAATGCAGGGAACGAATCAAAAAATTCTTTGGCGCCTCAGTCTACCAGTGTTGCCACTGATGTAATCTCAAATAATGGAAAATCTGGTGTTAGCAATGCTGGCATCACAAATGATGGGTATAATAGTAGTAAAGCTGGAGTAGTGAAGGTGAAAAAGAACATAAGAGTACAAGATAAAGGTGAGTTTTCGCAAAGCTCGAAGAGTAGTCAAGGCGAGTACAGTAGCAGTACTACTAGTATTAGTGATGACAGCAATGTAAGTGGATCCAGCTGTGGTAATAGACCCCATATGTCAAAGGATGCCAGGTGGGAAGCCATACGTCGAGTACGTATTCAGCAGGGAGTCCTCAGCTTAACACACTTCAATCTTTTAAGGAAGCTTGGTTGCGGAGACATTGGAACTGTGTATCTTGCTGAGCTGATTGGTGCAAATTGTCTATTTGCCATAAAAGTTATGGACAATGAATTTCTAGCTAGAAGAAAGAAACTGCCAAGGGCTCAAACCGAAAGAGAAATTCTAAGAATGCTTGATCATCCTTTTCTTCCCACACTTTATGCCCAATTTACATCTGATAATTTATCCTGTCTGGTGATGGAGTACTGTCCAGGGGGAGATCTTCACGTCCTTCGACAGAAACAGCCTGGCCGGATTTTTCCTGAAGCAGCTGCAAGGTTTTACGTTGCTGAAGTCCTGCTGGCTCTAGAGTATCTGCACATGCTTGGAGTTGTTTACCGAGATTTGAAACCAGAAAACATTCTTGTCCGAGAAGACGGTCATATTATGCTCACAGATTTTGACCTTTCCCTTAGGTGCTCTGTTAGTCCAACTCTTGTTAAATCATCTTCCTTCCGTGGTGATCCTCCAAGAGCTTCTGGTCCAAGTACCGAATCTAATTGTGTCGAGCCCTTCTGCATTACGCAGCCCTGTCAAGTCCCATGCTTCAGCCCCAGGTTTCTACCTTCTTCTGCTAAAGCAAGGAAGTTAAAAACCGATCTTGCTAACCGGGCAAGATCATTACCTCAGCTGATTGCCGAACCAACTGATGCTCGATCTAATTCCTTTGTTGGAACCCACGAATACTTGTCCCCTGAGATTATCAAAGGAGACGGACATGGGGCAGCTGTTGATTGGTGGACTTTTGGGGTGTTTCTCTACGAGCTTCTCTATGGTAGAACACCTTTCAAAGGCTGCAACAACGAAGAAACCTTAGCCAATGTTGTGTTGCAGAGCCTCAGATTCCCAGAAAGCCCCTTCGTGAGTTTCCAGGCGAGGGAACTCATTCGAGGGTTGTTGGTTAAGGACCCGGAAAATCGATTCGGAACACAAAAGGGGGCCGCCGAAATCAAGAAGCATCCCTTCTTCGAAGGCTTAAATTGGGCTTTGATTCGATGTGCTATTCCACCCGATCTTCCTGAGATTTGCGAGTTCGAATTTACGAATATGGTTTCTCAACAGAACAAGGGTAAGTTGTCGGAATGCAAAGCCACTGTAGAACATTTGGAGTTTGAGTTGTTTTAG 2610 42.53 MGSFTRTCEIVEAKEEADFVQHNNVRSSRSNYKMSGKDCSLPAMNLGYKDFLKNDINKLFAAIDLKQSKSFDLSQLTTGPMRKSTLKMAVTTGVSRSPGTEIVETVNLKQALRELSLTKASEMAAMKRLSKLASSSRASEAGRIKTLYNSVVIEASYSSPPFNDTKTSVVQKSLEMEQSTSKSKKILDDVQVPVVKLSSKNAHSSPRLACMTTQHDTEMTHERNDGVSGPRKVGTQTNKFTQKEKHSLTPSCSNSTVYMGEENKSIHSSSKAVNKVSTLKPVRKGRLQTAPSSNLVKGNRVGKSSRTTARPIKPVIRNKGISKKKVKEDTSGAKYTPSTYNEVNGDANSNTRQLICERCQCTLNNAGNESKNSLAPQSTSVATDVISNNGKSGVSNAGITNDGYNSSKAGVVKVKKNIRVQDKGEFSQSSKSSQGEYSSSTTSISDDSNVSGSSCGNRPHMSKDARWEAIRRVRIQQGVLSLTHFNLLRKLGCGDIGTVYLAELIGANCLFAIKVMDNEFLARRKKLPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQPGRIFPEAAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLVKSSSFRGDPPRASGPSTESNCVEPFCITQPCQVPCFSPRFLPSSAKARKLKTDLANRARSLPQLIAEPTDARSNSFVGTHEYLSPEIIKGDGHGAAVDWWTFGVFLYELLYGRTPFKGCNNEETLANVVLQSLRFPESPFVSFQARELIRGLLVKDPENRFGTQKGAAEIKKHPFFEGLNWALIRCAIPPDLPEICEFEFTNMVSQQNKGKLSECKATVEHLEFELF 869
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29931717 29935346 - Bda002369.1 Bda01g00389 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00389 869 Gene3D Transferase(Phosphotransferase) domain 1 565 635 - -
Bda01g00389 869 PANTHER FLIPPASE KINASE 1-RELATED 1 869 - -
Bda01g00389 869 Gene3D Transferase(Phosphotransferase) domain 1 711 836 - -
Bda01g00389 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Bda01g00389 869 Gene3D Phosphorylase Kinase; domain 1 483 564 - -
Bda01g00389 869 SMART serkin_6 485 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00389 869 ProSiteProfiles Protein kinase domain profile. 485 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00389 869 MobiDBLite consensus disorder prediction 423 458 - -
Bda01g00389 869 SUPERFAMILY Protein kinase-like (PK-like) 461 836 IPR011009 -
Bda01g00389 869 MobiDBLite consensus disorder prediction 422 461 - -
Bda01g00389 869 Pfam Protein kinase domain 715 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00389 869 Pfam Protein kinase domain 486 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00389 869 CDD STKc_phototropin_like 483 836 - -
Bda01g00389 869 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 869 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00389 Bda-Chr1:29931717 Bda09g01417 Bda-Chr9:46014998 0 dispersed
Bda13g00562 Bda-Chr13:6565897 Bda01g00389 Bda-Chr1:29931717 1.36E-112 dispersed
Bda13g01631 Bda-Chr13:39798999 Bda01g00389 Bda-Chr1:29931717 2.84E-180 dispersed
Bda01g00426 Bda-Chr1:30913219 Bda01g00389 Bda-Chr1:29931717 0 transposed
Bda01g00389 Bda-Chr1:29931717 Bda02g00716 Bda-Chr2:48004703 0 wgd
Bda01g00389 Bda-Chr1:29931717 Bda03g00708 Bda-Chr3:6018392 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69417 PF00069 Pkinase 4.60E-36 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00389 - K08286 mcha:111013600 1050.43