Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00426 ATGGGTTCATTCTCTCGAACTTGTGAGATTGTAGAAGCCAAGGAAGAGGCAGACTTTGTACAACATAATAATGTGAGATCTTCTCGATCAAATTACAAGATGAGCGGCAAAGATTGCTCACTACCTGCTATGAATTTAGGTTATAAAGATTTTCTGAAGAATGACATCAATAAACTTTTTGCCGCAATCGATCTCAAGCAATCTAAGAGTTTCGACCTTTCACAGCTAACCACTGGCCCAATGAGAAAAAGTACCTTAAAAATGGCAGTTACAACAGGAGTGTCTCGTTCACCAGGAACAGAAATAGTTGAAACAGTGAACTTGAAGCAAGCATTAAGGGAGTTATCCCTTACAAAGGCGTCAGAAATGGCTGCTATGAAACGGCTATCAAAGTTAGCCAGCTCTTCAAGAGCCTCAGAAGCTGGACGAATTAAAACATTGTACAACTCAGTTGTTATTGAAGCCAGTTATTCTAGCCCACCATTCAATGATACAAAAACAAGTGTGGTCCAAAAGTCACTGGAGATGGAGCAAAGCACGTCAAAATCCAAGAAGATTTTGGACGATGTTCAAGTGCCTGTAGTCAAACTATCAAGCAAAAATGCTCATTCTTCTCCTCGATTAGCTTGTATGACAACACAGCATGATACGGAGATGACTCATGAGAGAAATGACGGTGTGTCTGGGCCAAGGAAAGTTGGGACTCAAACGAACAAGTTTACACAGAAAGAGAAACATTCGTCAACTCCATCAACTCCATCTTGTTCAAACTCTACTGTTTACATGGGAGAGGAGAATAAAAGCATTCATTCTTCGAGCAAAGCAGTAAACAAAGTGTCAACATTAAAGCCAGTTCGGAAAGGCAGGTTGCAAACTGCACCCTCATCTAATCTGGTAAAAGGAAACAGGGTAGGAAAGTCATCTAGGACTACTGCCAGGCCTATCAAACCAGTTATCAGAAACAAGGGAATTTCTAAGAAAAAAGTGAAAGAAGACACAAGTGGAGCTAAATATACTCCTAGTACATATAACGAAGTAAATGGGGATGCAAATTCTAATACAAGACAGTTGATATGTGAAAGGTGCCAATGTACTCTTAATAATGCAGGGAACGAATCAAAAAATACTTTGGCGCCTCAGTCTACCAGTGTTGCCACTGATGTAATCTCAAATAATGGAAAATCTGGTGTTAGCAATGCTGGCATCACAAATGATGGGTATAATAGTAGTAAAGCTGGAGTAGTGAAGGTGAAAAAGAACATAAGAGTACAAGATAAAGGTGAGTTTTCGCAAAGCTCGAAGAGTAGTCAAGGCGAGTACAGTAGCAGTACTACTAGTATTAGTGATGACAGCAATGTAAGTGGATCCAGCTGTGGTAATAGACCCCATATGTCAAAGGATGCCAGGTGGGAAGCCATACGTCGAGTACGTATTCAGCAGGGAGTCCTCAGCTTAACACACTTCAATCTTTTAAGGAAGCTTGGTTGCGGAGACATTGGAACTGTGTATCTTGCTGAGCTGATTGGTGCAAATTGTCTATTTGCCATAAAAGTTATGGACAATGAATTTCTAGCTAGAAGAAAGAAACTGCCAAGGGCTCAAACCGAAAGAGAAATTCTAAGAATGCTTGATCATCCTTTTCTTCCCACACTTTATGCCCAATTTACATCTGATAATTTATCCTGTCTGGTGATGGAGTACTGTCCAGGGGGAGATCTTCACGTCCTTCGACAGAAACAGCCTGGCAGGATTTTTCCTGAAGCAGCTGCAAGGTTTTACGTTGCTGAAGTCCTGCTGGCTCTAGAGTATCTGCACATGCTTGGAGTTGTTTACCGAGATTTGAAACCAGAAAACATTCTTGTCCGAGAAGACGGTCATATTATGCTCACAGATTTTGACCTTTCCCTTAGGTGCTCTGTTAGTCCAACTCTTGTTAAATCATCTTCCTTCCGTGGTGATCCTCCAAGAGCTTCTGGTCCAAGTACCGAATCTAATTGTGTCGAGCCCTTCTGCATTACGCAGCCCTGTCAAGTCCCATGCTTCAGCCCCAGGTTTCTACCTTCTTCTGCTAAAGCAAGGAAGTTAAAAACCGATCTTGCTAACCGGGCTAGATCATTACCTCAGCTGATTGCCGAACCAACTGATGCTCGATCTAATTCCTTTGTTGGAACCCACGAATACTTGTCCCCTGAGATTATCAAAGGAGACGGACATGGGGCAGCTGTTGATTGGTGGACTTTTGGGGTGTTTCTCTACGAGCTTCTCTATGGTAGAACACCTTTCAAAGGCTGCAACAACGAAGAAACCTTAGCCAATGTTGTGTTGCAGAGCCTCAGATTCCCAGAAAGCCCCTTCGTGAGTTTCCAGGCGAGGGAACTCATTCGAGGGTTGTTGGTTAAGGACCCGGAAAATCGATTCGGAACACAAAAGGGGGCCGCCGAAATCAAGAAGCATCCCTTCTTCGAAGGCTTAAATTGGGCTTTGATTCGATGTGCTATTCCACCCGATCTTCCCGAGTTTTGCGAGTTCGAATTTACGAACATGGTTTCTCAACAGAACAAGGGTAAGTTGTCGGAATGCAAAGCCACTGTAGAACATTTGGAGTTTGAGTTGTTTTAG 2619 42.65 MGSFSRTCEIVEAKEEADFVQHNNVRSSRSNYKMSGKDCSLPAMNLGYKDFLKNDINKLFAAIDLKQSKSFDLSQLTTGPMRKSTLKMAVTTGVSRSPGTEIVETVNLKQALRELSLTKASEMAAMKRLSKLASSSRASEAGRIKTLYNSVVIEASYSSPPFNDTKTSVVQKSLEMEQSTSKSKKILDDVQVPVVKLSSKNAHSSPRLACMTTQHDTEMTHERNDGVSGPRKVGTQTNKFTQKEKHSSTPSTPSCSNSTVYMGEENKSIHSSSKAVNKVSTLKPVRKGRLQTAPSSNLVKGNRVGKSSRTTARPIKPVIRNKGISKKKVKEDTSGAKYTPSTYNEVNGDANSNTRQLICERCQCTLNNAGNESKNTLAPQSTSVATDVISNNGKSGVSNAGITNDGYNSSKAGVVKVKKNIRVQDKGEFSQSSKSSQGEYSSSTTSISDDSNVSGSSCGNRPHMSKDARWEAIRRVRIQQGVLSLTHFNLLRKLGCGDIGTVYLAELIGANCLFAIKVMDNEFLARRKKLPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQPGRIFPEAAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLVKSSSFRGDPPRASGPSTESNCVEPFCITQPCQVPCFSPRFLPSSAKARKLKTDLANRARSLPQLIAEPTDARSNSFVGTHEYLSPEIIKGDGHGAAVDWWTFGVFLYELLYGRTPFKGCNNEETLANVVLQSLRFPESPFVSFQARELIRGLLVKDPENRFGTQKGAAEIKKHPFFEGLNWALIRCAIPPDLPEFCEFEFTNMVSQQNKGKLSECKATVEHLEFELF 872
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30913219 30916858 + Bda002415.1 Bda01g00426 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00426 872 Pfam Protein kinase domain 718 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00426 872 Pfam Protein kinase domain 489 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00426 872 Gene3D Transferase(Phosphotransferase) domain 1 568 638 - -
Bda01g00426 872 MobiDBLite consensus disorder prediction 295 314 - -
Bda01g00426 872 MobiDBLite consensus disorder prediction 295 309 - -
Bda01g00426 872 Gene3D Transferase(Phosphotransferase) domain 1 714 835 - -
Bda01g00426 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Bda01g00426 872 MobiDBLite consensus disorder prediction 230 258 - -
Bda01g00426 872 SMART serkin_6 488 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00426 872 MobiDBLite consensus disorder prediction 218 258 - -
Bda01g00426 872 MobiDBLite consensus disorder prediction 426 461 - -
Bda01g00426 872 Gene3D Phosphorylase Kinase; domain 1 486 567 - -
Bda01g00426 872 PANTHER FLIPPASE KINASE 1-RELATED 1 872 - -
Bda01g00426 872 CDD STKc_phototropin_like 486 839 - -
Bda01g00426 872 SUPERFAMILY Protein kinase-like (PK-like) 464 840 IPR011009 -
Bda01g00426 872 MobiDBLite consensus disorder prediction 425 464 - -
Bda01g00426 872 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 872 - -
Bda01g00426 872 ProSiteProfiles Protein kinase domain profile. 488 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00426 Bda03g00708 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00426 Bda-Chr1:30913219 Bda03g00708 Bda-Chr3:6018392 0 dispersed
Bda01g00426 Bda-Chr1:30913219 Bda01g00389 Bda-Chr1:29931717 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69418 PF00069 Pkinase 4.60E-36 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00426 - K08286 mcha:111013600 1050.81