Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00434 ATGGGGATTCCTCAGGCGATGGAAATCCTCAGCGAAAGAGCAGCTTTTATTAGAGACTCGCTGCAAAAGAGCCAAACTATCACCAATAACATGGTCGACATTCTTGGCTCCTTTGACCACCGCCTCTCCGCCCTTGAAACCGCCATGCGTCCCACTCAGATAAGAACGCACTCAATCAGGAAGGCTCATGAGAATATTGATAAAACGGTCAAGGCTGCAGAGGTTATATTAGCGCAGTTCGACTTGTCTCGGAAGGCAGAGGCTAAAATATTAAGAGGGCCGCATGAGGACCTTGAAAGTTACTTGGAAGCCATTGACCAACTGAGAAGCATTATTCGCTTTTTTGGTGGCAATAAAAATTTTAAGAGTAGTGATTCAGTGCTTAACCACACAAACAACTTGCTTGCAAAAGCTATTTCTAAGCTTGAAGATGAATTCAGGCAGCTTCTGACGAACTACAGTAAGCCTGTTGAACCTGATCGTCTATTTGATTGCCTTCCCAACTCTCTACGTCCATCATCAGAAACATCGGGGCATCAAAGCAATGCTACTAGCAAGGGTAGTTCTATGCACCAAAGCAAAAGATCGGAGGAAACTGCTGTGTATACACCTCTGTCATTAATTCCTAATAGAGTTGTGCCGCTATTGCATGACTTAGCCCAGCAAATGGTTCAGGCTGGCCATCAACAACAGCTGCTGAGGATATACAGGGATACTCGTGCTTCGGTTTTGGAACAGAGTCTCAGAAAACTAGGCGTGGAGAGGCTCAGTAAAGACGATGTCCAGAAAATGCAGTGGGAGGCTTTAGAGGCTAAAATTGGGAATTGGATTCATCACATGCGTATTGCGGTCAAGCTGTTGTTGTCAGGGGAAAGGAAAATATGCGATCAAATATTTGAGGGTGTTGATTCTCTCAGGGATCAATGCTTTGCGGAAGTGACTGCAAACAGTGTGGCTGTGTTGCTAAGTTTTGGAGAGGCAATTGCCAAAAGCAAGAGATCGCCAGAAAAACTATTTGTTCTCTTAGACATGTATGAGATAATGAGGGAACTACAATCAGAGATTGAAACACTGTTTGGAAACAAAGCAAGCCATGAAATGAGGGAAGCTGCATTGAGTTTGACAAAACGTCTCGCTCAGACAGCCCAGGAAACTTTCGCTGACTTTGAAGAAGCTGTAGAAAAGGATGCAACAAAAACTGCTATTCTTGATGGAACTGTCCATCCCTTGACCAGCTACGTGATAAATTATGTGAAATTTTTATTCGATTATCAGTCCACTTTGAAGCTACTTTTTGAAGACTTTGATAATAGTGATCCAGATGTTCAGTTAGCAAAGGTAACTACAAGGATTATGCTTGGTCTTCTTAATAATCTGGATGCGAAATCTAAGCAGTATAAAGACCAGGCATTGACTCAATTATTTCTCATGAACAACATTCACTATATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAGGATGTGTTGGGAGATGATTGGGTACAAATACACCGAAGAATTGTCCAACAACATGCTAATCAGTACAAGAGAGTTTCCTGGGCAAAGATTTTGCAGTGCCTCACTATTCAGGGCCTAAATCAGTCGGGCGGAGGCGATGCGGGCAGCAGTGGACTTTCAAGAGCAATGGTGAAAGAAAGGTTCAAGACATTTAATATTCAATTTGAAGAGCTTCATCAAAGACAGTCTCAGTGGACAGTTCCCGATAGCGAGTTGCGCGAATCGTTGAGGCTGGCCGTCGCTGAAGTCCTCTTGCCTGCATACAGATCTTTCGTCAAACGTTTCGGGCCAATGATAGAGAATGGGAAGAATCCTCAGAAATACATCAGATACACTCCTGAGAATCTTGAACGGATGTTGAATGACTTTTTTGAGGGTAAAACATTTGGTGAACAGAAACGGTAA 1923 43.21 MGIPQAMEILSERAAFIRDSLQKSQTITNNMVDILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTVKAAEVILAQFDLSRKAEAKILRGPHEDLESYLEAIDQLRSIIRFFGGNKNFKSSDSVLNHTNNLLAKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSETSGHQSNATSKGSSMHQSKRSEETAVYTPLSLIPNRVVPLLHDLAQQMVQAGHQQQLLRIYRDTRASVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHHMRIAVKLLLSGERKICDQIFEGVDSLRDQCFAEVTANSVAVLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQSEIETLFGNKASHEMREAALSLTKRLAQTAQETFADFEEAVEKDATKTAILDGTVHPLTSYVINYVKFLFDYQSTLKLLFEDFDNSDPDVQLAKVTTRIMLGLLNNLDAKSKQYKDQALTQLFLMNNIHYIVRSVRRSEAKDVLGDDWVQIHRRIVQQHANQYKRVSWAKILQCLTIQGLNQSGGGDAGSSGLSRAMVKERFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPMIENGKNPQKYIRYTPENLERMLNDFFEGKTFGEQKR 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31203404 31208557 - Bda002428.1 Bda01g00434 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00434 640 MobiDBLite consensus disorder prediction 164 196 - -
Bda01g00434 640 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 637 IPR004140 GO:0000145|GO:0006887
Bda01g00434 640 Coils Coil 132 152 - -
Bda01g00434 640 Pfam Exo70 exocyst complex subunit 275 628 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bda01g00434 640 Gene3D Exocyst complex component Exo70 74 640 - -
Bda01g00434 640 SUPERFAMILY Cullin repeat-like 76 631 IPR016159 -
Bda01g00434 640 MobiDBLite consensus disorder prediction 169 196 - -
Bda01g00434 640 Coils Coil 348 368 - -
Bda01g00434 640 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 637 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00434 Bda-Chr1:31203404 Bda06g00731 Bda-Chr6:9967832 3.85E-119 dispersed
Bda01g00674 Bda-Chr1:33883227 Bda01g00434 Bda-Chr1:31203404 4.94E-66 transposed
Bda03g00036 Bda-Chr3:501989 Bda01g00434 Bda-Chr1:31203404 3.87E-66 transposed
Bda15g00126 Bda-Chr15:3666648 Bda01g00434 Bda-Chr1:31203404 0 transposed
Bda01g01624 Bda-Chr1:52131909 Bda01g00434 Bda-Chr1:31203404 4.56E-24 transposed
Bda01g00338 Bda-Chr1:28985615 Bda01g00434 Bda-Chr1:31203404 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00434 K07195 - twl:119990264 1058.51