Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00467 ATGGAAGACTTGGAGAGTAGTAGTAGTAGTAGCAGCAGACCGGTGGATTCTCTGCCTCGGAGTTGGAAACGGAGACAGAAGGCTGATGTTTACCAAGAAATTCTTCATCGACTCAGGAACTTGAATGAAGAAGTGACAAGAAATGTCGAGTTCGAGACTGAGCTTTGGTCGCATTTCTCGAGACTTCCTGTCAGGTATGCAGTGGACGTGAACGTCGACAGTGCTCTAGATGTTCTCATGCACCAGCGACTACTGTTGATGGCACGTGATCCCGCTAGTAGACCAGCCATTGAAGTTCGTCTGGTGCAGATACCTCCTTCAATTTTGAGGTCTAACAGCAATGGAATTCCGTCCCCAAAAACTTACCCTCCCCCAGCCTTCAGTTCATCGGCAGGTTGCGAAATTGGTTTTGATATCAAGTATTTACATGTTCAAGATCAAGAGACCACATTTCCCAGGTCCATGCATGAGATTACAATTTCAACAGTAGACAAGCCAAAGCTCCTTAGCCAGTTGACAACCTTAATTTCCGAGTTAGGGCTTAATATTCAAGAGGCACATGCATTTTCCACCGTGGATGGGTATTCTTTGGATGTTTTTGTAGTTGATGGTTGGGCCCTAGAGGGGACCAAGCAGCTTAAAGATTTATTGATCAAAGAAATATCTAAGGTAGAGGCATATTCTTTGTTGAAGCATCGATCAAGTTCTCATTTAGGAAGCCACGTTGAAGCTGGAGTCGAGTTCAATTCAACTCATGTAAACATTCCTATTGATGGAGCTGGTGTATGGGAAATTGATGTCAATTTGTTGGCATTTGAACAGAAAATTGCTTCTGGATCTTGTAGCGACTTATACAAAGGTTATTACTGTGGTCAAGATGTTGCAATAAAACTTCTCAGGGTCGAAAATCTATATGAAATTGCAGTGAAGGAATTTATTCAAGAAGTCAATATTATGAGAAAAGTGCGACACAAGAATGTTGTTCAATTCATTGGGGCATGCACCAGATCTCCAAGCTTGTGCATTATCACTGAATATATGTCGGGTGGAAGCATGTACGACTTTTTGCGCAGACACAAGGGTGTTTTGACACTCTCATCTTTGGTCAGAGTAGCAATTGAAGTATCCAAGGGCATGAATTATTTGCATCAAAATAATATAATGCATAGGGATCTGAAAGCTGCCAACCTTTTGGTGGATGAAGATGGTGTAGTCAAACTTGCTGATTTTGGTGTCGCTAGAGTGCAAGTTCAATCAGGTGTTATGACTGGAGAAACAGGAACATACCGCTGGATGGCTCCCGAGATTATTGAGCACAAGCCATATGATCATAAAGCTGATGTTTTTAGCTTTGGTATTGTATTGTGGGAACTGTTAACATGCAAGCTTCCCTATCAGGACTTGACCCCATTACAGGCAGCCGTCGGAGTAGTTCAGAAGGGTCTAAGACCCATTATTCCTGAAGGTACTCACCCAATGATGGTGAATTTAATGGAGAAATGTTGGCAGCAGGACCCGTCCTTGAGACCAGAATTCTTTCAGATTACTGAACTTTTACTGCATTTGTCGAAGATGGTAAAGTTTCTAACTCGTCTAGTGCTTTTTCTTTTTCAAACATTCACTTTTAGATTGTTTGAGAATGCTTGGACAGATTGCAGATGA 1662 42.06 MEDLESSSSSSSRPVDSLPRSWKRRQKADVYQEILHRLRNLNEEVTRNVEFETELWSHFSRLPVRYAVDVNVDSALDVLMHQRLLLMARDPASRPAIEVRLVQIPPSILRSNSNGIPSPKTYPPPAFSSSAGCEIGFDIKYLHVQDQETTFPRSMHEITISTVDKPKLLSQLTTLISELGLNIQEAHAFSTVDGYSLDVFVVDGWALEGTKQLKDLLIKEISKVEAYSLLKHRSSSHLGSHVEAGVEFNSTHVNIPIDGAGVWEIDVNLLAFEQKIASGSCSDLYKGYYCGQDVAIKLLRVENLYEIAVKEFIQEVNIMRKVRHKNVVQFIGACTRSPSLCIITEYMSGGSMYDFLRRHKGVLTLSSLVRVAIEVSKGMNYLHQNNIMHRDLKAANLLVDEDGVVKLADFGVARVQVQSGVMTGETGTYRWMAPEIIEHKPYDHKADVFSFGIVLWELLTCKLPYQDLTPLQAAVGVVQKGLRPIIPEGTHPMMVNLMEKCWQQDPSLRPEFFQITELLLHLSKMVKFLTRLVLFLFQTFTFRLFENAWTDCR 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31775580 31781963 - Bda002468.2 Bda01g00467 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00467 553 ProSiteProfiles ACT domain profile. 157 237 IPR002912 -
Bda01g00467 553 MobiDBLite consensus disorder prediction 1 17 - -
Bda01g00467 553 SMART serkin_6 270 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00467 553 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 528 - -
Bda01g00467 553 MobiDBLite consensus disorder prediction 1 20 - -
Bda01g00467 553 Gene3D Phosphorylase Kinase; domain 1 260 348 - -
Bda01g00467 553 Gene3D Transferase(Phosphotransferase) domain 1 349 531 - -
Bda01g00467 553 CDD STKc_MAP3K-like 276 519 - -
Bda01g00467 553 Pfam Protein tyrosine and serine/threonine kinase 271 519 IPR001245 GO:0004672|GO:0006468
Bda01g00467 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Bda01g00467 553 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 20 528 - -
Bda01g00467 553 SUPERFAMILY ACT-like 154 218 IPR045865 -
Bda01g00467 553 ProSiteProfiles Protein kinase domain profile. 270 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00467 553 Coils Coil 28 48 - -
Bda01g00467 553 SUPERFAMILY Protein kinase-like (PK-like) 247 519 IPR011009 -
Bda01g00467 553 PRINTS Tyrosine kinase catalytic domain signature 344 357 IPR001245 GO:0004672|GO:0006468
Bda01g00467 553 PRINTS Tyrosine kinase catalytic domain signature 446 468 IPR001245 GO:0004672|GO:0006468
Bda01g00467 553 PRINTS Tyrosine kinase catalytic domain signature 427 437 IPR001245 GO:0004672|GO:0006468
Bda01g00467 553 PRINTS Tyrosine kinase catalytic domain signature 381 399 IPR001245 GO:0004672|GO:0006468
Bda01g00467 553 PRINTS Tyrosine kinase catalytic domain signature 490 512 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00467 Bda-Chr1:31775580 Bda15g01020 Bda-Chr15:19128759 0 dispersed
Bda01g00467 Bda-Chr1:31775580 Bda11g01817 Bda-Chr11:53342819 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69419 PF07714 PK_Tyr_Ser-Thr 2.10E-71 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00467 - - tcc:18591636 656.366