Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda01g00472 | CGAAACGCAGTGGTGCATACGTATAGACATGGATTCTCAGGATTTGCCGCCCGTTTATCAAAAGAAGAAGCTAGATCAATGGCGGAAACACCAGGAGTTGTATCAGTTTTTCCTGATCCTATTATTCAACTTCACACTACTCGATCATGGGGTTTCTTAACGTCCCAAACAGAAACAAAAAAGGACAAAAAGCCTACATTAAATGATGGCTCCTTTTCTCTTGGATCAGACACAGTTATTGGGATCTTGGACTCAGGTTTGACGATGGTATTTGATATCTTTTTTTCTTTTTGTGGGTTCCCAAACATAGTTTGTGATCGGAAAAGTACAGGAATTTGGCCGGAATCGGAAAGCTTTAACGACGAGGGTATGGGTCCAATTCCGTCTAACTGGAAAGGAACTTGCATGGAAGCTCATGATTTCTTTTCCTACAACTGTAATAGGAAGCTAATTGGGGCGAGATACTATAATAGCTCTCTTGAAATTGAATATGGTTATCAAGAGCAGTCACCAAGGGATAGTGACGGTCACGGCACCCACGTGGCAGCCACGGCAGCTGGTAGAATCGTCTCCCGTGCCTCCTACTATGGATTGGCTGGCGGGTCAGCGAAGGGTGGGTCCCCCTGGTCAAGGATCGCCGCGTACGGTGTATGCACGTCAGACGGCTGTCGTGGCTCCGCAATCCTGGCAGGGTTTGACGATGCGATCGCCGATGGAGTTCACGTCTTATCATTATCACTTGGCGCAGTCTTTTACTTCCGACCCAGATTAGTGGAGGATCCAATTGCGATCGGAGCGTTTCATGCGGTGGAGCACGGAATCATCGTGGTCTGCTCCGCCGGTAACGACGGTCCTGCCACTTACACTGTGGTCAACGTTTACCCTTGGATTTTGACGGTGGCAGCCTCTTCTATTGACCGGCAGTTTCTGTCGGATTTGGTGTTGGGAAATCTCAAAGTGATTAAGGGAGAAGCCATAAATTTCTCACCTCTGAGAAGATCTCCCTCCTACCCACTGGTTCTCGCCATTTCTGCCAAGAAAGATGGAGCGGACGACAGTGATGCTAGAAACTGCAATCCGGATTCATTGGACGGTGCTGCTTTAAGAGGGAGTATTGTGTTCTGTTACAACGACGATGACCAGTACAGTGTAGAGGACAAGATGGAGAAGGTGAAGAGTCTTGGAGGGATAGGCATAGTTTTGGTGGACGATGAATCAAAAGCAGTGCCAGATAATTATGGGTCTTTTCCCTTGACTCTCATCAACTCCATGGATGCCTCTGAGGTCCTTTCCTACATCAACTCTACCAGAAATCCATTAGCAACTATCCTCCCGACCGTGACCATCTTGGGTGACAAGCCAGCACCAATTATACCGTATTTCTCATCCAGAGGGCCAGCTCGTGATTCGCTAAACATACTCAAGCCTGATATTTCTGCGCCAGGTGTGAACATTCTTGCTGCGTGGATAGGCAATGACAACACTATAGCTCTAGAAGGAAAAGAAACCCCACTTTTCAATATCATCTCAGGAACTTCCATGGCTTGCCCCCATGTTTCTGGAGTTGTCGCCTCGGTCAGATCACAGAATCCTGCGTGGAGTCCTTCTGCAATAAAATCAGCCATAATGACTACAGCAACTCAGAGAAACAATTTGGGAGGTCCGATTACGACGGATGAAGGTTTAGAGGCCACGCCGTACGACTATGGTGCAGGAGAAGTAACAATATCTGAACCATTCCAGCCAGGATTAGTTTACGAAAGCACCACCAATGACTACCTAAATTACCTGTGTTACAGTGGGGAAGATTTGAGAACGATAAAGATAATCTCAAGCTCAGTTCCTGATGATTTTTCCTGTCCAGGGGACGCAGATGACGATTTCATATCTAACATCAACTACCCATCAATCGCAATATCCAAATTCAAAGTCGAGGGGAAGAACATCAGTAGAACTGTCACGAACGTGGCCGGCGATGGTTACACGATTTACAGAGTCATCGTCGACACCCCCAAGGAAATAAGCGTCAGAGTAGTTCCAGACAGACTGATATTTGGAAGAAACAAGGAGAAACAGAGCTACCAGTTGATCTTCTCCTCCACTGTTTTTCCCCTGAAGAAGGGGGAGGCTTTTGGGTCGATTACATGGACTAATGGTAAATATAAAGTCAGGAGTCCTTTTGTAGTGAAAGTTTAA | 2196 | 46.63 | RNAVVHTYRHGFSGFAARLSKEEARSMAETPGVVSVFPDPIIQLHTTRSWGFLTSQTETKKDKKPTLNDGSFSLGSDTVIGILDSGLTMVFDIFFSFCGFPNIVCDRKSTGIWPESESFNDEGMGPIPSNWKGTCMEAHDFFSYNCNRKLIGARYYNSSLEIEYGYQEQSPRDSDGHGTHVAATAAGRIVSRASYYGLAGGSAKGGSPWSRIAAYGVCTSDGCRGSAILAGFDDAIADGVHVLSLSLGAVFYFRPRLVEDPIAIGAFHAVEHGIIVVCSAGNDGPATYTVVNVYPWILTVAASSIDRQFLSDLVLGNLKVIKGEAINFSPLRRSPSYPLVLAISAKKDGADDSDARNCNPDSLDGAALRGSIVFCYNDDDQYSVEDKMEKVKSLGGIGIVLVDDESKAVPDNYGSFPLTLINSMDASEVLSYINSTRNPLATILPTVTILGDKPAPIIPYFSSRGPARDSLNILKPDISAPGVNILAAWIGNDNTIALEGKETPLFNIISGTSMACPHVSGVVASVRSQNPAWSPSAIKSAIMTTATQRNNLGGPITTDEGLEATPYDYGAGEVTISEPFQPGLVYESTTNDYLNYLCYSGEDLRTIKIISSSVPDDFSCPGDADDDFISNINYPSIAISKFKVEGKNISRTVTNVAGDGYTIYRVIVDTPKEISVRVVPDRLIFGRNKEKQSYQLIFSSTVFPLKKGEAFGSITWTNGKYKVRSPFVVKV | 731 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 31796977 | 31799785 | + | Bda002473.1 | Bda01g00472 | 472 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda01g00472 | 731 | Pfam | Fibronectin type-III domain | 631 | 729 | IPR041469 | - | |
| Bda01g00472 | 731 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 511 | 521 | IPR023828 | - | |
| Bda01g00472 | 731 | Gene3D | Peptidase S8/S53 domain | 110 | 593 | IPR036852 | GO:0004252|GO:0006508 | |
| Bda01g00472 | 731 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 1 | 45 | IPR037045 | - | |
| Bda01g00472 | 731 | Gene3D | - | 306 | 450 | - | - | |
| Bda01g00472 | 731 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 110 | 729 | IPR045051 | - | |
| Bda01g00472 | 731 | PRINTS | Subtilisin serine protease family (S8) signature | 510 | 526 | IPR015500 | - | |
| Bda01g00472 | 731 | PRINTS | Subtilisin serine protease family (S8) signature | 173 | 186 | IPR015500 | - | |
| Bda01g00472 | 731 | PRINTS | Subtilisin serine protease family (S8) signature | 75 | 94 | IPR015500 | - | |
| Bda01g00472 | 731 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 49 | 580 | - | - | |
| Bda01g00472 | 731 | Gene3D | - | 597 | 731 | - | - | |
| Bda01g00472 | 731 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.1 | 5 | 88 | - | - | |
| Bda01g00472 | 731 | CDD | Peptidases_S8_3 | 43 | 547 | IPR034197 | - | |
| Bda01g00472 | 731 | CDD | PA_subtilisin_like | 312 | 443 | - | - | |
| Bda01g00472 | 731 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 5 | 88 | IPR045051 | - | |
| Bda01g00472 | 731 | SUPERFAMILY | Subtilisin-like | 110 | 577 | IPR036852 | GO:0004252|GO:0006508 | |
| Bda01g00472 | 731 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.1 | 110 | 729 | - | - | |
| Bda01g00472 | 731 | Pfam | Peptidase inhibitor I9 | 3 | 45 | IPR010259 | - | |
| Bda01g00472 | 731 | Pfam | Subtilase family | 75 | 550 | IPR000209 | GO:0006508|GO:0008236 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00472 | Bda-Chr1:31796977 | Bda08g00958 | Bda-Chr8:18725052 | 7.80E-164 | dispersed | |
| Bda14g00014 | Bda-Chr14:119200 | Bda01g00472 | Bda-Chr1:31796977 | 4.67E-50 | dispersed | |
| Bda01g00472 | Bda-Chr1:31796977 | Bda10g00887 | Bda-Chr10:43336039 | 1.09E-154 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda01g00472 | K25898 | - | qsu:112036476 | 932.554 |