Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda01g00497 | ATGTCGACCGGAATCGGAAAATGCAGCAAAATCCGCCACATTGTACGGCTGCGTCAGATGCTGCGGCGGTGGCGCAATAAGGCGAAGTTATCAGCCAACCGCCCGCCGCCGGATGTGCCGGCGGGACACATAGCGGTGTGTGTGGGAACTAACTGTACCAGATATGTGGTGCGAGCTACGTACTTGAACCATCCGATATTCAAAAGCCTTCTTGTTCGAGCTGAAGAGGAATACGGATTCAGACACCAAGGTCCGCTGCTCATACCTTGCGACGAGTCGGTTTTCGAAGAAGTTATCCGCCACATTGCCAGGTTCGAATCAGGAAACTCCGGTCGTTACGTGAACCTAGATGACTGCCAGAGATACTGCCATGTCGGTATCAGAAATAACCTCGATTTCTTGCCGGAATCAAGACCGTTACTTCCCAGTTCAGGAGAGAAAACCATTTGGTAA | 453 | 51.43 | MSTGIGKCSKIRHIVRLRQMLRRWRNKAKLSANRPPPDVPAGHIAVCVGTNCTRYVVRATYLNHPIFKSLLVRAEEEYGFRHQGPLLIPCDESVFEEVIRHIARFESGNSGRYVNLDDCQRYCHVGIRNNLDFLPESRPLLPSSGEKTIW | 150 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 31967685 | 31968137 | - | Bda002500.1 | Bda01g00497 | 497 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda01g00497 | 150 | Pfam | Auxin responsive protein | 16 | 101 | IPR003676 | GO:0009733 | |
| Bda01g00497 | 150 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 6 | 143 | IPR003676 | GO:0009733 | |
| Bda01g00497 | 150 | PANTHER | SMALL AUXIN-UP RNA-RELATED | 6 | 143 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00497 | Bda-Chr1:31967685 | Bda03g00282 | Bda-Chr3:2473500 | 3.84E-82 | dispersed | |
| Bda06g00717 | Bda-Chr6:9878142 | Bda01g00497 | Bda-Chr1:31967685 | 2.88E-15 | transposed | |
| Bda01g00497 | Bda-Chr1:31967685 | Bda14g00585 | Bda-Chr14:4479893 | 1.92E-60 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda01g00497 | K14488 | - | qsu:112012848 | 247.669 |