Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00510 ATGGCAGGCTTCTTCTATCTAGGTGGAAGAGAAGGCCCACCAAGCAAACAAGAAGACGATCAAGCTGAAAGGGAGCAGAACCTGTTTTTATACAGAAACGAGGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAGTACAGTCATCAACAACAACAAAACCAAAACTTGAACAGCAACCTGTCGTTCGGAGTGGGTCCTGGCCACCGAAGAAGCTTCGTCAACGTTTCCGATGATCCGTCCAGGTTAGGATTCACCGTGAGTAGACAAGGAGGGGCGGTTGGAGGAATGAATTGTCAAGACTGTGGAAATCAGGCTAAGAAAGATTGCTCCCATCTTAGGTGTAGAACTTGCTGTAAGAGTCGAGGGTTTCAGTGTCAAACCCACGTCAAGAGCACGTGGGTTCCGGCGTCCAAACGCCGCGAAAGACAGCAACAACTCTTGGCTTCGAATTCTCAGCAAGAACTGCAATTTCCGAAAAGGCAGAGGGAAAATCAAGGACTTTCCTCTTCTCTTGCCTGTGCTAGACTATCCCCGGCAGCCACAGGGTTAGAGGTGGCACAATTTCCAGCGGAAGTGAATTCTGCAGCAGTTTTTCGGTGTGTGAAAGTGAGCGCTATGGATGATGTGGATGACCAGTTCGCTTATCAGACGGCTGTGAACATCGGAGGACATGTTTTTAAGGGAATTCTGTACGATCAAGGACCGGAAGGAAGCTATTCTGCAGGAGGGGATAGCTCTTCCGGCCACGGCGGAGAGGGAATCCAGCAACTCAATCTCATAACCGGAATGATCGGAAACACTTCCGCAGTTTCCGCAACTAAAGCTGCCACTTCTAACCCATCTGCTTGTTTGGTCGATTCTTCAATATATCCTCCGCTCAATGCTTTCATGGCTGGTACGCAATTCTTCCCTTCTTCAAGGTCATAA 930 48.71 MAGFFYLGGREGPPSKQEDDQAEREQNLFLYRNEEIYNKGFEIWPQYSHQQQQNQNLNSNLSFGVGPGHRRSFVNVSDDPSRLGFTVSRQGGAVGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPASKRRERQQQLLASNSQQELQFPKRQRENQGLSSSLACARLSPAATGLEVAQFPAEVNSAAVFRCVKVSAMDDVDDQFAYQTAVNIGGHVFKGILYDQGPEGSYSAGGDSSSGHGGEGIQQLNLITGMIGNTSAVSATKAATSNPSACLVDSSIYPPLNAFMAGTQFFPSSRS 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32082199 32083348 + Bda002515.1 Bda01g00510 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00510 309 Pfam Domain of unknown function (DUF702) 96 237 - -
Bda01g00510 309 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 306 IPR007818 GO:0003700|GO:0006355
Bda01g00510 309 MobiDBLite consensus disorder prediction 1 23 - -
Bda01g00510 309 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 188 236 IPR006511 -
Bda01g00510 309 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 98 140 IPR006510 -
Bda01g00510 309 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 306 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00510 Bda08g01246 CCT
Bda01g00510 Bda01g01519 CCT
Bda01g00510 Bda08g01246 ECH
Bda01g01519 Bda01g00510 ECH
Bda01g00510 Bda01g01519 ECH
Bda01g00510 Bda03g00274 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00510 Bda-Chr1:32082199 Bda10g00166 Bda-Chr10:4910528 2.08E-86 dispersed
Bda01g00510 Bda-Chr1:32082199 Bda01g01519 Bda-Chr1:51050589 4.03E-116 wgd
Bda01g00510 Bda-Chr1:32082199 Bda14g00993 Bda-Chr14:8140463 2.70E-71 wgd
Bda01g00510 Bda-Chr1:32082199 Bda03g00274 Bda-Chr3:2407882 4.72E-168 wgd
Bda01g00510 Bda-Chr1:32082199 Bda08g01246 Bda-Chr8:50963196 1.14E-128 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15357 PF05142 DUF702 5.20E-63 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00510 - - jre:108991308 391.734