Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00552 ATGGCGTCTGCATCAGAGAAATCGTCACTTTCTCAGCCAATGCTCGCTGAGCTTCCGATCTCCGAAGTTCCGGGCGATTGCGGCCTCCCTTTTTTCGGTGCGATTAGAGATAGAATGGATTATTTCTATTTCCAAGGGAAGGATGAGTATTTCCGATCACGCATGGTGAAGTATAAATCCACAGTGTTCAGATCTAATATGCCCCCTGGTCCTTTCATCTCCGGCGACTCCAGAGTCGTCGTTCTTCTTGACGGCAAGAGTTTTCCTGTACTTTTCGACATGTCCAAGGTTGAAAAGAAAAATGTTTTCAACGGAACTTACGTTCCGTCGACCAAACTAATGGGAGGCTACAGAGTCCTCGCCTACCTCGACCCGTCGGAGCCGAATCATGAGAAGCTGAAAAACCTCGTCTTCTATCTCCTTCAATCTCGGCGAGATCATTTCATTCCGGAATTCCATTTAAGCTTTACGGAGCTCTTCGATGGTCTAGAAACCACGATTTCGGCCGAAGGAAAAGCTAGCTTTGCCGGTCCCAATCAGCAGGCCTCGTTTAACTTCCTCGGTCGTGCATTTTTCGGAATTGATCCAATAAAAACAAAACTGGGAACTGAAGGTCCTACGTTAATTCAAAAATGGGTTTTCTTTCAGATTGGTCCTGTTCTGAGTCTCGGTCTACCCTTCGTTCTAGATGACTTACTCCTCCATAACTTTCTGTTTCCTCCATTTCTCATGAAAAGAGATTACAGAAAGCTATACGATTTTTTCTACGAGTCAACGGGATCTCTGCTCGAAGAAGCTGAAAAATTAGGTTTACCGAAAGAAGAAGCTTGCCATAATATTCTGTATGCCACTTGCTTTAATGCTTTTGGAGGGATGGTGCTCCTCTTTCCCATTATTGTCAAATGGGTCGGGTTGGCCGGAGTTACTTTACACACTCAACTGGTTGAGGAGATTCGAGCCGCGTTAAAATTCAAAGATGAAAAGGTGACCTTGGCCGCGATGGAAAAGATGCCGTTGATGAAGTCCACCGTCTACGAAGTGTTGAGAATCGAACCGAAGGTGGCGTTCCAGTACGCCAGAGCAAAGAAAGATCTAGTGATCGAGAGCCACGACGCTGCGTTTCGGGTCAAGAAAGGAGAGTTGTTATTTGGTTACCAACCGTTCGCTACGAAAGATCCGAAGTTATTTGAGAAACCGGAAGAGTTCGTGGCAGATCGGTTTCTGGGAGAGGATGAGAAGTTATTGAAGTACGTGCTGTGGTCGAACGGATCGGAGACGGAAAATCCCTCAGTCGGAAACAAGCAGTGTGCGGGAAAGAACTTGGTGGTGTTGATGTGCAGGCTGTTTCTGGTGGAATTCTTCAGGCGGTACGACACGTTGAAGATAACGGTGAAAACGGCGTCGTTGGGAGACATCGTTACTATTGATTCTCTCACTAAAGCCACTTTGTGA 1452 46.35 MASASEKSSLSQPMLAELPISEVPGDCGLPFFGAIRDRMDYFYFQGKDEYFRSRMVKYKSTVFRSNMPPGPFISGDSRVVVLLDGKSFPVLFDMSKVEKKNVFNGTYVPSTKLMGGYRVLAYLDPSEPNHEKLKNLVFYLLQSRRDHFIPEFHLSFTELFDGLETTISAEGKASFAGPNQQASFNFLGRAFFGIDPIKTKLGTEGPTLIQKWVFFQIGPVLSLGLPFVLDDLLLHNFLFPPFLMKRDYRKLYDFFYESTGSLLEEAEKLGLPKEEACHNILYATCFNAFGGMVLLFPIIVKWVGLAGVTLHTQLVEEIRAALKFKDEKVTLAAMEKMPLMKSTVYEVLRIEPKVAFQYARAKKDLVIESHDAAFRVKKGELLFGYQPFATKDPKLFEKPEEFVADRFLGEDEKLLKYVLWSNGSETENPSVGNKQCAGKNLVVLMCRLFLVEFFRRYDTLKITVKTASLGDIVTIDSLTKATL 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32448295 32449746 + Bda002565.1 Bda01g00552 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00552 483 Gene3D Cytochrome P450 15 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g00552 483 PANTHER CYTOCHROME P450 26 12 481 - -
Bda01g00552 483 PRINTS E-class P450 group IV signature 337 353 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g00552 483 PRINTS E-class P450 group IV signature 390 408 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g00552 483 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g00552 483 SUPERFAMILY Cytochrome P450 19 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g00552 483 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 12 481 - -
Bda01g00552 483 Pfam Cytochrome P450 312 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00552 Bda08g01303 CCT
Bda01g00552 Bda08g01303 ECH
Bda01g00552 Bda03g00244 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00552 Bda-Chr1:32448295 Bda08g01314 Bda-Chr8:52945448 0 dispersed
Bda01g00552 Bda-Chr1:32448295 Bda01g00553 Bda-Chr1:32465879 0 tandem
Bda01g00451 Bda-Chr1:31570821 Bda01g00552 Bda-Chr1:32448295 0 wgd
Bda01g00552 Bda-Chr1:32448295 Bda03g00244 Bda-Chr3:1938116 0 wgd
Bda01g00552 Bda-Chr1:32448295 Bda08g01303 Bda-Chr8:52765024 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00552 K01723 - jre:108981519 643.269