Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00581 ATGGCTGAAAACTTTGTACGCCTCACTCGCGGCGCGAAGAAGAGAGAGGCAGCATCGGTGTTAGTTGAAGAACGATCGGTTAAGAAGAAGCGTGTGGTGTTGGGAGAGCTTCCCAATCTGCAGAATGCTAATGTATCAGTAGGTCTAAAGCCTTCTTCAGAGCCAGAGAAGCAGAAATGTTTGGGCAAGACTAAGGTAAAAAGTTCGAAAATAGCTATCAAAAAGAAATCCAAAGCACGGAAGAATAGCTGTTTGAAATTGGAAAATGATCCTGATTCGGACGACCCCCAAATTTGTGCGCCTTATGCTACAGATATTTATGACTATCTTCACAAAATGGAGATGGAACCAAAAAGAAGACCACTCCCCAATTATCTTGAGAAAATTCAGAAAGATATCACAGCTAATATGAGAGGAGTATTGGTAGATTGGTTAGTGGAAGTGGCCGAAGAGTACAAACTCTGTTCAGATACTCTTTATCTCTCCATCTCCTACATCGATAGATTCTTATCTTTGCACACACTTAATAGACAAAGGCTTCAACTTCTTGGTGTTTCATCCGTGCTCATAGCTTCTAAATACGAAGAGATCAGTCCTCCACATGTAGAAGAATTGTGCTATATCACAGACAACACTTACACAAAAGAAGAGGTGGTGAAAATGGAGGCTGATATACTCAAATCTTTGAACTTTGAAATTGGAAATCCTACAACAAAGGCTTTCTTAAGGCGGATTATTAGTTTTTCGCAAGAGAGAAATAAAGCACCCAACTTGCAAATAGAGTTTCTGGGCTACTATCTTGCAGAACTAAGCTTACTAGATTATAATTTCTTGAAATTCTTGCCTTCATTGGTTGCTTCGGCTGTTGTTTTCTTGGCAAAGTTCATAACTCAACCGAAGATGCACCCATGGTCTCAAACACTGGAACAATATTCTGGGTATACATCGAACGAGTTAAAAGATTGCGTGCTTATGCTGCTTGACTTGTATCTGGGCAGAAGAGGAGGTTCACTCTTAGCTATAAGAGAGAAATACAAGCAACATAAGTTCAAATGCGTGGCGTCTCTACCTTCTCCTCCAGAGATTCCTGCTTCATATTTTGAAGAAGTACGAGTGTTTGATTCTTAA 1128 40.16 MAENFVRLTRGAKKREAASVLVEERSVKKKRVVLGELPNLQNANVSVGLKPSSEPEKQKCLGKTKVKSSKIAIKKKSKARKNSCLKLENDPDSDDPQICAPYATDIYDYLHKMEMEPKRRPLPNYLEKIQKDITANMRGVLVDWLVEVAEEYKLCSDTLYLSISYIDRFLSLHTLNRQRLQLLGVSSVLIASKYEEISPPHVEELCYITDNTYTKEEVVKMEADILKSLNFEIGNPTTKAFLRRIISFSQERNKAPNLQIEFLGYYLAELSLLDYNFLKFLPSLVASAVVFLAKFITQPKMHPWSQTLEQYSGYTSNELKDCVLMLLDLYLGRRGGSLLAIREKYKQHKFKCVASLPSPPEIPASYFEEVRVFDS 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32830373 32832261 - Bda002600.1 Bda01g00581 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00581 375 SMART cyclin_7 240 328 IPR013763 -
Bda01g00581 375 SMART cyclin_7 143 227 IPR013763 -
Bda01g00581 375 SUPERFAMILY Cyclin-like 236 361 IPR036915 -
Bda01g00581 375 PIRSF Cyclin_A_B_D_E 4 368 IPR039361 -
Bda01g00581 375 SUPERFAMILY Cyclin-like 94 233 IPR036915 -
Bda01g00581 375 Pfam Cyclin, C-terminal domain 236 358 IPR004367 -
Bda01g00581 375 ProSitePatterns Cyclins signature. 138 169 IPR006671 -
Bda01g00581 375 SMART Cyclin_C_2 236 359 IPR004367 -
Bda01g00581 375 PANTHER CYCLIN-A3-1-RELATED 22 370 - -
Bda01g00581 375 CDD CYCLIN 137 226 IPR013763 -
Bda01g00581 375 Pfam Cyclin, N-terminal domain 105 233 IPR006671 -
Bda01g00581 375 Gene3D - 105 355 - -
Bda01g00581 375 CDD CYCLIN 236 327 IPR013763 -
Bda01g00581 375 Gene3D - 121 234 - -
Bda01g00581 375 PANTHER CYCLINS 22 370 IPR039361 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00581 Bda01g01560 CCT
Bda01g00581 Bda01g01560 ECH
Bda01g01560 Bda01g00581 ECH
Bda01g00581 Bda03g00194 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00581 Bda-Chr1:32830373 Bda01g01446 Bda-Chr1:50385131 1.65E-102 dispersed
Bda01g00581 Bda-Chr1:32830373 Bda03g00194 Bda-Chr3:1558109 0 wgd
Bda01g00581 Bda-Chr1:32830373 Bda08g01363 Bda-Chr8:54121845 3.51E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00581 K06627 - zju:107420528 500.745