Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00590 ATGGAGAGCTATTTGACTGGAAATTTTGCGGACGTCAAGCCTAAGAATTCATCGGATGAAGCCCTTCAAAGATGGAGGAATTTGTGTTGGTTGGTGAAGAATAAGAAACGAAGGTTTCGCTTCACTGCTAATCTCTCCAAGCGATATGAGGCCGAGGATATCCGACGCTCCAATAAGGAGAAGTTTAGAGTTGCAGTTCTGGTTTCACAAGCTGCCCTTCAATTTCTTGATGGTTTGACTTTGTCAAAGGACTACACAGCACCAGAAGAGGTCAAAGCTGCCGGTTTTGGAATCGATGCTGAAGAACTAGCAACCATTGTTGACTGCCGAGATGTGAAGAAGCTCAAGATCCACGATGGTGTCGATGGTATTGCAAAAAAACTTTCCACATCAATAACCGATGGCATTTCTACTTCAGAGCATTTGATCAAGAAGAGAAAAGATATATACGGAGTTAACAAGTTCACTGAACTCCCTCCTCGTGGTTTTTGGGTTTTCGTTTGGGAAGCCCTTCAGGATATGACTCTAATGATACTCGGAATTTGTGCAATTGTGTCTCTTCTTGTCGGCATAGTAATGGAAGGATGGCCAAAGGGAGCTAATGATGGACTTGGAATTGTTGCAAGCATTTTGCTGGTTGTATTTGTTACTGCTACCAGTGACTATAAACAATCTCTTCAATTCAAGGATTTAGATAAAGAGAAGAAAAAAATAGCAATCCAGGTGACCAGAAACGGATTCAGACAAAAAATGTCGATATATGATCTACTTCCTGGCGATATTGTTCATCTTGCCATTGGAGATCAGGTTCCAGCTGATGGACTTTTTATCTGTGGATTTTCTGTTCTGATCAATGAATCCAGTTTGACTGGTGAGAGCGAACCAGTTAATGTGAATTGTGACAAACCTTTTCTGCTCTCCGGAACAAAAGTTCAAGACGGATCGTGTAAGATGCTAGTTACTTCTGTCGGAATGAAAACCCAGTGGGGTAAGTTAATGGCTACTCTTTCCGAAGGAGGAGATGATGAAACTCCATTGCAGGTCAAACTAAATGGGGTGGCAACTATAATTGGAAAAATAGGTCTGTTTTTTGCTGTTGTCACTTTTGCTGTTTTGGTGCAAGGATTGTTTAGCCAGAAGTTACAAGAAGGGTCCCACTGGGTGTGGACCGGAGAAGATATGAGGCAAATTTTGGAATTCTTCGCTATTGCTGTCACTATAGTAGTGGTGGCAGTTCCCGAAGGGCTTCCTTTGGCTGTGACATTAAGTCTTGCTTTCGCCATGAAAAAGATGATGAATGACAAGGCACTTGTCAGGCATCTTGCAGCCTGTGAAACAATGGGATCTGCCACTACTATTTGTAGTGACAAAACTGGAACCTTAACGACTAACCGGATGACTGTTGTGAAAGCCTGCATTTGCTTTAAAGTCAAGGAAGTCAACGGCCCCGAAGATGCTTCTAGTTACTGCTCCGAAATTCCATCATCTGGTCTGAAGCTCCTGCTTCAATCCATATTCAATAACACTGGAGGAGAAATTGTGAAGAACAAAAACCGAGAGAATGAAATACTTGGGACACCAACTGAGTCTGCTCTTTTGGAATTCGGCCTCTCACTCGGTGGAGATTTTCAACACGAACGCCAAGTTGTTAAGATTGTGAGAGTTGAGCCTTTCAATTCTCTTAAGAAAAGAATGGGGTCAGTTATTGAACTTTCAGAAGGTGGCTTCCGGGCACACTCTAAAGGTGCTTCAGAGATAGTTTTAGCAGCATGTGACAAAGTCTTAGACCCAAATGGTGAAGTTGTTCCTCTTGATGAAACTTCAATCAATCTTTTAAATAATACAATTGAACAATTTGCCAGTGAAGCTCTCCGAACTCTCTGTCTCGCTTACATGGAGGTTGGAAGTGAGTACAATGTTGAAAGTCCAATGCCTGTTAAGGGGTATACTTGCATTGGAATTGTGGGCATCAAAGATCCCGTTCGGCCTGGTGTCAAAGAATCCGTTGCAATTTGTAGGGCTGCTGGTATTGCTGTGAGAATGGTTACTGGAGATAATATAACCACTGCAAAGGCCATTGCCAGGGAATGTGGAATTTTGACTGACGATGGTATTGCCATTGAAGGTCCAGATTTCCGCAAGAAGAGTGAGGAAGAAATGCACGAAATAATTCCGACAATTCAGGTAATGGCTAGATCTTCACCAATGGATAAACATACTCTTGTGAAACATCTTCGCACCACTTTTCAAGATGTTGTTGCAGTGACCGGTGATGGTACAAATGATGCTCCTGCTCTTCATGAAGCAGATATAGGACTTGCAATGGGAATTGCTGGTACTGAGGTTGCAAAAGAGAGCGCTGATGTGATCATTTTGGACGACAATTTCTCGACTATTGTGACTGTGGCGAAATGGGGACGTTCGGTGTATGTCAATATTCAGAAGTTCGTTCAGTTTCAGCTCACAGTAAATGTCGTTGCACTTCTGGTCAATTTTTCATCAGCTTGTTTGACAGGAAATGCTCCTCTCACAGCCGTTCAGCTTCTCTGGGTCAACATGATAATGGACACCCTTGGAGCCCTTGCACTGGCTACTGAGCCTCCAAACGACGACCTGATGAAACGATCACCAGTTGGCCGAAAAGGAAACTTCATCAATAATGTGATGTGGAGAAATATCTTAGGACAGTCTTTGTACCAGTTTGTCATTATTTGGTGTCTCCAAACAAGAGGAAAAGCTCTTTTCCGCCTCACAGGTCCAGACTCCGATTTGATCCTCAACACGCTTATTTTCAACTCCTTCGTCTTCTGTCAGGTTTTCAATGAGGTAAACTCTAGAGAGATGGAGAAGATAAATGTGTTTAAAGGTTTATTGAAGAACTACGTCTTTGTGGGAGTCCTCACTTGCACTGTTGTATTCCAAATCATAATAGTTCAGTTTCTGGGTACATTTGCAAGCACATCGCCGTTAACTCTTCAGCAATGGGTAGTTTCCGTCTTCCTCGGATTTCTTGGCATGCCAGTTGCAGTAGCTCTAAAGATGATCCCTCATGGATCGGACTGA 3063 42.8 MESYLTGNFADVKPKNSSDEALQRWRNLCWLVKNKKRRFRFTANLSKRYEAEDIRRSNKEKFRVAVLVSQAALQFLDGLTLSKDYTAPEEVKAAGFGIDAEELATIVDCRDVKKLKIHDGVDGIAKKLSTSITDGISTSEHLIKKRKDIYGVNKFTELPPRGFWVFVWEALQDMTLMILGICAIVSLLVGIVMEGWPKGANDGLGIVASILLVVFVTATSDYKQSLQFKDLDKEKKKIAIQVTRNGFRQKMSIYDLLPGDIVHLAIGDQVPADGLFICGFSVLINESSLTGESEPVNVNCDKPFLLSGTKVQDGSCKMLVTSVGMKTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLFSQKLQEGSHWVWTGEDMRQILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKACICFKVKEVNGPEDASSYCSEIPSSGLKLLLQSIFNNTGGEIVKNKNRENEILGTPTESALLEFGLSLGGDFQHERQVVKIVRVEPFNSLKKRMGSVIELSEGGFRAHSKGASEIVLAACDKVLDPNGEVVPLDETSINLLNNTIEQFASEALRTLCLAYMEVGSEYNVESPMPVKGYTCIGIVGIKDPVRPGVKESVAICRAAGIAVRMVTGDNITTAKAIARECGILTDDGIAIEGPDFRKKSEEEMHEIIPTIQVMARSSPMDKHTLVKHLRTTFQDVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFINNVMWRNILGQSLYQFVIIWCLQTRGKALFRLTGPDSDLILNTLIFNSFVFCQVFNEVNSREMEKINVFKGLLKNYVFVGVLTCTVVFQIIIVQFLGTFASTSPLTLQQWVVSVFLGFLGMPVAVALKMIPHGSD 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32895573 32899926 - Bda002611.1 Bda01g00590 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00590 1020 Gene3D - 17 77 - -
Bda01g00590 1020 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 108 1017 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bda01g00590 1020 PANTHER CATION TRANSPORTING ATPASE 3 1017 - -
Bda01g00590 1020 Pfam Cation transporting ATPase, C-terminus 841 1015 IPR006068 -
Bda01g00590 1020 SUPERFAMILY HAD-like 452 861 IPR036412 -
Bda01g00590 1020 CDD P-type_ATPase_Ca_PMCA-like 145 889 - -
Bda01g00590 1020 SUPERFAMILY Calcium ATPase, transmembrane domain M 120 1016 IPR023298 -
Bda01g00590 1020 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 665 IPR023299 GO:0000166
Bda01g00590 1020 SFLD p-type atpase 436 808 IPR044492 -
Bda01g00590 1020 Gene3D - 169 1014 - -
Bda01g00590 1020 Pfam Ca2+-ATPase N terminal autoinhibitory domain 8 50 IPR024750 GO:0005516
Bda01g00590 1020 Gene3D - 141 337 - -
Bda01g00590 1020 Pfam Cation transport ATPase (P-type) 515 594 - -
Bda01g00590 1020 SMART Cation_ATPase_N_a_2 114 191 IPR004014 -
Bda01g00590 1020 SUPERFAMILY Calcium ATPase, transduction domain A 240 334 IPR008250 -
Bda01g00590 1020 Gene3D - 464 660 IPR023299 GO:0000166
Bda01g00590 1020 Pfam Cation transporter/ATPase, N-terminus 120 186 IPR004014 -
Bda01g00590 1020 Gene3D - 451 801 IPR023214 -
Bda01g00590 1020 Pfam haloacid dehalogenase-like hydrolase 740 796 - -
Bda01g00590 1020 Pfam E1-E2 ATPase 239 432 - -
Bda01g00590 1020 SFLD Haloacid Dehalogenase 436 808 - -
Bda01g00590 1020 PRINTS H+-transporting ATPase (proton pump) signature 756 772 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g00590 1020 PRINTS H+-transporting ATPase (proton pump) signature 788 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g00590 1020 PRINTS H+-transporting ATPase (proton pump) signature 612 630 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g00590 1020 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Bda01g00590 1020 PRINTS P-type cation-transporting ATPase superfamily signature 756 775 - -
Bda01g00590 1020 PRINTS P-type cation-transporting ATPase superfamily signature 653 664 - -
Bda01g00590 1020 PRINTS P-type cation-transporting ATPase superfamily signature 780 792 - -
Bda01g00590 1020 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Bda01g00590 1020 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Bda01g00590 1020 PRINTS P-type cation-transporting ATPase superfamily signature 675 685 - -
Bda01g00590 1020 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1017 - -
Bda01g00590 1020 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 387 474 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g00590 1020 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 723 837 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00590 Bda03g00182 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00590 Bda-Chr1:32895573 Bda11g01478 Bda-Chr11:21500638 0 dispersed
Bda03g00653 Bda-Chr3:5552237 Bda01g00590 Bda-Chr1:32895573 1.47E-11 dispersed
Bda01g00590 Bda-Chr1:32895573 Bda01g00591 Bda-Chr1:32909329 0 tandem
Bda03g00859 Bda-Chr3:7442225 Bda01g00590 Bda-Chr1:32895573 4.80E-58 transposed
Bda10g00562 Bda-Chr10:39610916 Bda01g00590 Bda-Chr1:32895573 0 transposed
Bda11g00111 Bda-Chr11:1476110 Bda01g00590 Bda-Chr1:32895573 0 transposed
Bda01g00590 Bda-Chr1:32895573 Bda03g00182 Bda-Chr3:1491857 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00590 K01537 - zju:107433706 1703.72