Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00591 ATGGAGAGCTATTTGACTGGAAATTTTGCGGACGTCAAGCCTAAGAATTCATCGGATGAAGCCCTTCAAAGATGGAGGAATTTGTGTTGGTTGGTGAAGAATAAGAAACGAAGGTTTCGCTTCACTGCTAATCTCTCCAAGCGATATGAGGCCGAGGATATCCGACGCTCCAATAAGGAGAAGTTTAGAGTTGCAGTTCTGGTTTCACAAGCTGCCCTTCAATTTCTTGATGGTTTGACTTTGTCAAAGGACTACACAGCACCAGAAGAGGTCAAAGCTGCCGGTTTTGGAATCGATGCTGAAGAACTAGCAACCATTGTTGACTGCCGAGATGTGAAGAAGCTCAAGATCCACGATGGTGTCGATGGTATTGCAAAAAAACTTTCCACATCAATAACCGATGGCATTTCTACTTCAGAGCATTTGATCAAGAAGAGAAAAGATATATACGGAGTTAACAAGTTCACTGAACTCCCTCCTCGTGGTTTTTGGGTTTTCGTTTGGGAAGCCCTTCAGGATATGACTCTAATGATACTCGGAATTTGTGCAATTGTGTCTCTTCTTGTCGGCATAGTAATGGAAGGATGGCCAAAGGGAGCTAATGATGGACTTGGAATTGTTGCAAGCATTTTGCTGGTTGTATTTGTTACTGCTACCAGTGACTATAAACAATCTCTTCAATTCAAGGATTTAGATAAAGAGAAGAAAAAAATAGCAATCCAGGTGACCAGAAACGGATTCAGACAAAAAATGTCGATATATGATCTACTTCCTGGCGATATTGTTCATCTTGCCATTGGAGATCAGGTTCCAGCTGATGGACTTTTTATCTGTGGATTTTCTGTTCTGATCAATGAATCCAGTTTGACTGGTGAGAGCGAACCAGTTAATGTGAATTGTGACAAACCTTTTCTGCTCTCCGGAACAAAAGTTCAAGACGGATCGTGTAAGATGCTAGTTACTTCTGTCGGAATGAAAACCCAGTGGGGTAAGTTAATGGCTACTCTTTCCGAAGGAGGAGATGATGAAACTCCATTGCAGGTCAAACTAAATGGGGTGGCAACTATAATTGGAAAAATAGGTCTGTTTTTTGCTGTTGTCACTTTTGCTGTTTTGGTGCAAGGATTGTTTAGCCAGAAGTTACAAGAAGGGTCCCACTGGGTGTGGACCGGAGAAGATATGAGGCAAATTTTGGAATTCTTCGCTATTGCTGTCACTATAGTAGTGGTGGCAGTTCCCGAAGGGCTTCCTTTGGCTGTGACATTAAGTCTTGCTTTCGCCATGAAAAAGATGATGAATGACAAGGCACTTGTCAGGCATCTTGCAGCCTGTGAAACAATGGGATCTGCCACTACTATTTGTAGTGACAAAACTGGAACCTTAACGACTAACCGGATGACTGTTGTGAAAGCCTGCATTTGCTTTAAAGTCAAGGAAGTCAACGGCCCCGAAGATGCTTCTAGTTACTGCTCCGAAATTCCATCATCTGGTCTGAAGCTCCTGCTTCAATCCATATTCAATAACACTGGAGGAGAAATTGTGAAGAACAAAAACCGAGAGAATGAAATACTTGGGACACCAACTGAGTCTGCTCTTTTGGAATTCGGCCTCTCACTCGGTGGAGATTTTCAACACGAACGCCAAGTTGTTAAGATTGTGAGAGTTGAGCCTTTCAATTCTCTTAAGAAAAGAATGGGGTCAGTTATTGAACTTTCAGAAGGTGGCTTCCGGGCACACTCTAAAGGTGCTTCAGAGATAGTTTTAGCAGCATGTGACAAAGTCTTAGACCCAAATGGTGAAGTTGTTCCTCTTGATGAAAATGTGGGGACCAATACCCCGTACTTCATAATTTAA 1854 42.39 MESYLTGNFADVKPKNSSDEALQRWRNLCWLVKNKKRRFRFTANLSKRYEAEDIRRSNKEKFRVAVLVSQAALQFLDGLTLSKDYTAPEEVKAAGFGIDAEELATIVDCRDVKKLKIHDGVDGIAKKLSTSITDGISTSEHLIKKRKDIYGVNKFTELPPRGFWVFVWEALQDMTLMILGICAIVSLLVGIVMEGWPKGANDGLGIVASILLVVFVTATSDYKQSLQFKDLDKEKKKIAIQVTRNGFRQKMSIYDLLPGDIVHLAIGDQVPADGLFICGFSVLINESSLTGESEPVNVNCDKPFLLSGTKVQDGSCKMLVTSVGMKTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLFSQKLQEGSHWVWTGEDMRQILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKACICFKVKEVNGPEDASSYCSEIPSSGLKLLLQSIFNNTGGEIVKNKNRENEILGTPTESALLEFGLSLGGDFQHERQVVKIVRVEPFNSLKKRMGSVIELSEGGFRAHSKGASEIVLAACDKVLDPNGEVVPLDENVGTNTPYFII 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32909329 32911648 - Bda002613.1 Bda01g00591 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00591 617 SMART Cation_ATPase_N_a_2 114 191 IPR004014 -
Bda01g00591 617 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 387 474 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g00591 617 Pfam Cation transporter/ATPase, N-terminus 120 186 IPR004014 -
Bda01g00591 617 PANTHER CATION TRANSPORTING ATPASE 3 607 - -
Bda01g00591 617 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Bda01g00591 617 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Bda01g00591 617 Pfam Cation transport ATPase (P-type) 515 594 - -
Bda01g00591 617 Gene3D - 169 450 - -
Bda01g00591 617 PRINTS Sodium/potassium-transporting ATPase signature 447 468 - -
Bda01g00591 617 PRINTS Sodium/potassium-transporting ATPase signature 578 596 - -
Bda01g00591 617 PRINTS Sodium/potassium-transporting ATPase signature 204 224 - -
Bda01g00591 617 Gene3D - 17 77 - -
Bda01g00591 617 Gene3D - 451 463 IPR023214 -
Bda01g00591 617 Gene3D - 464 608 IPR023299 GO:0000166
Bda01g00591 617 PANTHER CALCIUM-TRANSPORTING ATPASE 3 607 - -
Bda01g00591 617 SUPERFAMILY Calcium ATPase, transduction domain A 240 334 IPR008250 -
Bda01g00591 617 Pfam Ca2+-ATPase N terminal autoinhibitory domain 8 50 IPR024750 GO:0005516
Bda01g00591 617 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Bda01g00591 617 Pfam E1-E2 ATPase 239 432 - -
Bda01g00591 617 Gene3D - 141 337 - -
Bda01g00591 617 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 463 608 IPR023299 GO:0000166
Bda01g00591 617 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 108 607 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bda01g00591 617 SUPERFAMILY Calcium ATPase, transmembrane domain M 120 448 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00591 Bda-Chr1:32909329 Bda03g00182 Bda-Chr3:1491857 0 dispersed
Bda01g00590 Bda-Chr1:32895573 Bda01g00591 Bda-Chr1:32909329 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00591 K01537 - csv:101221694 971.844