Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00593 ATGGAGAATCACTCAAAGCTGAATAAAAATTTCATGGCAGATCTGAAAGGTGATGACAATACATGGTTTTCTAGTATTTTCTCGGGAAATATGTTGTGCGCTTGTTCAGGGGAGCAATTCAAGTTCGAAGAACGGCCAAACTCGCCGGAATCTCTTGCGACGAGGGATTTCTCTGCAAGTTGCCTTTCGTCGAGAACTGGAGACTGGGAGTCAAAATATGAAGATATTCAAGTTGATGAAGTTGAATCCACTCTGAAAGAAGCCCTCTCCTTGAACTACGAGGAAGCGAGGGCTTTGTTGGGGAGACTTGAATATCAGAGAGGGAATTTTGATGCTGCCCTTCAGGTTTTTCAGGGTATTGATGTTAAAGTTTTAGCCCCAAGAATGACTAAAGCCATTGCCGAGAGAATGAAGCTGCGAAAACCTCGATCGAAAAGCGATTCTATTCCTTCTGGTTTGATGTCCATTCATTCTGTCAGCCTACTGCTCGAAGCAATACTTCTCAAGGCAAAATCACTCCAGGAACTTGGGAGATTCAAAGAGGCTGCAAAGGAATGCAAAACAATTCTTGATGTAGTAGACTCTGCATTGCCAATCGGAATGCCTGGGTTGGTTGAAGAAGACAGCAAATTGCAGGAAATGCTTCACAAGGCGTTAGAGTTGCTACCAACATTATGGACAAGCTCAGGATATCTCGACGAGGCTATTATTGCTTATCGACGAGCTCTCATTAAGCCATGGAATTTCGAGCTGGAGAGGTTAGCCAACGTACAAAAGGAATTGGCTGCTATGTTGCTCTATGGCGGGGTTGAGTCGAGCTTGTCCCTCCCTCTACACATATGGGGTCCAATCTCTTCTACTGCCCCTAAAAATAACACAGAAGAAGCAATAGTTTTACTCTTAATACTCGTGAGGAAAGCGATGATGAGAGAAATCAAATGGGATCAAGAGATTATGGACCATCTGACCTACGCCCTTTCAATAACTGGACAGTTCGAATTGCTGGCCGAACACGTGGAGCATATACTTCCAGGTATATATGGTAGAGCTGAGAGATGGTTTTTTCTTGCCCTTTGTTATAGTGCTGCAAAACAGCAGGAGACTTCCCTAAATCTTTTGAAGAAAATTTGCAGTTGTTCTGAGGGAAATCAAAAACCCCATTTTCCAGCTTTATTGTTGGGAGCGAAATTGTGTTCCGAGAATGCGAAACATGCTCGCAAAGGCATATTTTTCGCTCGTAAATTGATCGACTCGATCAATCATCAAAACCAGCATTCTCTCTGTCAAGCTCATAAATTTCTTGGTATTTGCTATGGCAGTGCAGCTAGAATTTCCGTATTGGATTCCGAAAGAGTTCTTTTTCAGAAAGAGGCTTTGAAAATCTTGAATTTAGCTGCAAATGGCTCTAATGATCCTGAACTAAGGTTTAACCTTGGGCTGGAACATGCAATGCAGAGGAATGTGGATCTTGCCTTTGATAATTTGATGTTGTATGTAGAAATGGTTGGTGGAAGTGGAAAGGGATTGAAGCTGTTGGCACTTATAATTTCTGCTCAACAGCGGCTCGAAAATGCCGAAACCATTGTTGACTTTGCTCTGGATGAGACTGAGTCGAAGGGTCATTTAGAACTTCTTCGATTAAAGGGCGCTCTTCAAATTGCACAGAAACATCCCAAGCAAGCAATAGAAACCTATAGAATCATGCTAGCTCATATTCAAGCACAAAGGGAGATTCAGCTTCAATCTGAGAACCTAGAGCAAGCAAAAAAACCCCATTCTGAGGCATCCGAAGAGAGAAATTTCGAAGTGGCAGCATGGCAAGATTTAGCCACCGTTTATTTGGAACTCGGTTCATGGGCAGATGCCGAAATTTGTCTTGACAAAGCCAAGGCGATCGAGTATCATTCGCCGATAACTTGGCACAAAACAGGTACTTTGTTAGAAACAAAATCGATGCATAGGGAAGCTCTTGTATCATTCTCACTCTCTTTATCGGTTGATCCTAATTATGTCCCGAGCATTGTTTCTACCGCTGAAGTGTTGATGAAATTAGGCGACCAATCTCTTCCGATTGCACGAAGTTTATTAATGAGTGCTATAAGATTAGAGCCAACTAACCACGATGCATGGTTCAGTCTGGGACTTATATCGAGAAAGGAAGGGTTGCTTCAACAAGCTGGTGACTGTTTTCAAGCTGCATACGATCTCGAGTCCTCGGCACCTGTCCGAAGCTTTATCTAA 2241 42.84 MENHSKLNKNFMADLKGDDNTWFSSIFSGNMLCACSGEQFKFEERPNSPESLATRDFSASCLSSRTGDWESKYEDIQVDEVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDVKVLAPRMTKAIAERMKLRKPRSKSDSIPSGLMSIHSVSLLLEAILLKAKSLQELGRFKEAAKECKTILDVVDSALPIGMPGLVEEDSKLQEMLHKALELLPTLWTSSGYLDEAIIAYRRALIKPWNFELERLANVQKELAAMLLYGGVESSLSLPLHIWGPISSTAPKNNTEEAIVLLLILVRKAMMREIKWDQEIMDHLTYALSITGQFELLAEHVEHILPGIYGRAERWFFLALCYSAAKQQETSLNLLKKICSCSEGNQKPHFPALLLGAKLCSENAKHARKGIFFARKLIDSINHQNQHSLCQAHKFLGICYGSAARISVLDSERVLFQKEALKILNLAANGSNDPELRFNLGLEHAMQRNVDLAFDNLMLYVEMVGGSGKGLKLLALIISAQQRLENAETIVDFALDETESKGHLELLRLKGALQIAQKHPKQAIETYRIMLAHIQAQREIQLQSENLEQAKKPHSEASEERNFEVAAWQDLATVYLELGSWADAEICLDKAKAIEYHSPITWHKTGTLLETKSMHREALVSFSLSLSVDPNYVPSIVSTAEVLMKLGDQSLPIARSLLMSAIRLEPTNHDAWFSLGLISRKEGLLQQAGDCFQAAYDLESSAPVRSFI 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32937129 32941020 + Bda032904 Bda01g00593 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00593 746 SUPERFAMILY TPR-like 580 738 IPR011990 GO:0005515
Bda01g00593 746 Gene3D Tetratricopeptide repeat domain 577 742 IPR011990 GO:0005515
Bda01g00593 746 SMART tpr_5 707 740 IPR019734 GO:0005515
Bda01g00593 746 SMART tpr_5 163 196 IPR019734 GO:0005515
Bda01g00593 746 SMART tpr_5 542 575 IPR019734 GO:0005515
Bda01g00593 746 SMART tpr_5 603 636 IPR019734 GO:0005515
Bda01g00593 746 SMART tpr_5 350 383 IPR019734 GO:0005515
Bda01g00593 746 SMART tpr_5 637 670 IPR019734 GO:0005515
Bda01g00593 746 PANTHER PROTEIN NPGR1 31 745 - -
Bda01g00593 746 SUPERFAMILY TPR-like 98 500 IPR011990 GO:0005515
Bda01g00593 746 SUPERFAMILY TPR-like 468 570 IPR011990 GO:0005515
Bda01g00593 746 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Bda01g00593 746 Coils Coil 86 106 - -
Bda01g00593 746 Gene3D Tetratricopeptide repeat domain 45 269 IPR011990 GO:0005515
Bda01g00593 746 Gene3D Tetratricopeptide repeat domain 288 576 IPR011990 GO:0005515
Bda01g00593 746 Coils Coil 515 535 - -
Bda01g00593 746 PANTHER PROTEIN NPG1 31 745 IPR043376 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00593 Bda-Chr1:32937129 Bda09g00603 Bda-Chr9:8754309 3.92E-178 dispersed
Bda01g00593 Bda-Chr1:32937129 Bda13g00048 Bda-Chr13:681565 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00593 K21843 - qsu:112035093 971.459