Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00604 | ATGGGCTCCGATGGGGTCTATACCGGTCTCGTTCTTGGACTGATCAATCACCCCAAGGAAGAGAAGTCTATCCAATCAATTCCCGAGAAAAACAAGAATCCATCATCAAAATTTGACAACTCCTTTCTCACACTAGCCCTCTCCGACGCGACTAACCGACCTGCAACAATCTCCGACGTTAGTAAGCAGGTTTGCGGCGAACCATATGATATACTCCCGCAGGCTTCTTCTGCTAGCGCTGTGTCATCGTTTTCAAACTCCTCCAGTTTTAAGCGCGATAGAGACTTCTGCGATGGTGAAGAGATAGAAGCAGAGACCGAGGTAGACATACAGCCAATCTCTTCTAAGGTCAGTGAGGAAGAAGAAGATGGCACTGGCAGTCCGAGGAAAAAACTTAGACTCACAAAAGATCAGTCCGCCATTTTAGAATACAGCTTCAAAGAGCATGCAACTCTAAACCCCAAACAAAAACAAGACTTGGCAAGGAAGTTGAGTCTAAGCACAAGACAAGTGGAAGTCTGGTTTCAAAACAGGAGGGCGAGAACCAAGCTGAAGCAAACCGGAGAGAGCTGCGAGCTGCTGAAGAAATGCTGCGAATCACTAACAGAAGAGAACAAAAGGCTAAGGAAAGCGCTTCAAGACATGAAAACACTAAAATCAGCTCCTCATCCGCCATTTTACATGCAGCTCAAAACAGCAACTCTCTCCATTTGCCCTTCTTGCGAGAGAATATGCAGCGCCGGCGATGGGTCATCTCCCACCAGCACTCTGTTAGTTGGTTCAAACGTTGGTTAA | 795 | 46.79 | MGSDGVYTGLVLGLINHPKEEKSIQSIPEKNKNPSSKFDNSFLTLALSDATNRPATISDVSKQVCGEPYDILPQASSASAVSSFSNSSSFKRDRDFCDGEEIEAETEVDIQPISSKVSEEEEDGTGSPRKKLRLTKDQSAILEYSFKEHATLNPKQKQDLARKLSLSTRQVEVWFQNRRARTKLKQTGESCELLKKCCESLTEENKRLRKALQDMKTLKSAPHPPFYMQLKTATLSICPSCERICSAGDGSSPTSTLLVGSNVG | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 33050342 | 33051354 | + | Bda002627.1 | Bda01g00604 | 604 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00604 | 264 | MobiDBLite | consensus disorder prediction | 114 | 131 | - | - | |
Bda01g00604 | 264 | Pfam | Homeodomain | 129 | 183 | IPR001356 | GO:0003677 | |
Bda01g00604 | 264 | ProSitePatterns | 'Homeobox' domain signature. | 160 | 183 | IPR017970 | GO:0000981|GO:0006355 | |
Bda01g00604 | 264 | Coils | Coil | 191 | 221 | - | - | |
Bda01g00604 | 264 | PANTHER | - | 74 | 253 | - | - | |
Bda01g00604 | 264 | SUPERFAMILY | Homeodomain-like | 119 | 186 | IPR009057 | - | |
Bda01g00604 | 264 | ProSiteProfiles | 'Homeobox' domain profile. | 125 | 185 | IPR001356 | GO:0003677 | |
Bda01g00604 | 264 | PANTHER | HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN | 74 | 253 | - | - | |
Bda01g00604 | 264 | SMART | halz | 185 | 230 | IPR003106 | GO:0006355|GO:0043565 | |
Bda01g00604 | 264 | SMART | HOX_1 | 127 | 189 | IPR001356 | GO:0003677 | |
Bda01g00604 | 264 | CDD | homeodomain | 128 | 186 | IPR001356 | GO:0003677 | |
Bda01g00604 | 264 | Gene3D | - | 122 | 191 | - | - | |
Bda01g00604 | 264 | MobiDBLite | consensus disorder prediction | 108 | 131 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g00604 | Bda03g00154 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00604 | Bda-Chr1:33050342 | Bda14g01299 | Bda-Chr14:14333252 | 6.52E-56 | dispersed | |
Bda04g00754 | Bda-Chr4:56760556 | Bda01g00604 | Bda-Chr1:33050342 | 1.64E-07 | transposed | |
Bda01g00604 | Bda-Chr1:33050342 | Bda03g00154 | Bda-Chr3:1282273 | 5.47E-132 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15375 | PF00046 | Homeodomain | 8.80E-17 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00604 | K09338 | - | qsu:111996753 | 247.669 |