Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00616 ATGCCTACAATGTCAAGAGCGCCTTCTCTTTCCGAGCTTAGCCTTCTCATCCTTTGTTCTGCGCTCTTCGTTTCCGCGCTCTCCTTTGTTGCTCTCTCGCTCCCGGAATTTACTGACGTATCTCTCTCCAATTCCACTTTGGAATCCAACAATGCATCTCTCTCCAGGAACAAAGAAGGTAGCTTCGCAGACATCATTGATCGTGCTCTCCAGAATGAATTCAAAGAGAGTGACCAGAATGAAGCTACTGATGCTGGAAGTTTCAATAACAGAGTCACGGAACAGCAGGCAGTTTTAGAAACTGTAGCCAGGGTGAAGCCAAAGAAAAATGACACAAAGGAGGAAAAGCCTTTTCAACTTCATCACGTCTTCAATTTGGATAATGATAATAGAGCGGAAGATACCCCAACATTGATAGATCGAAGAGACAATGTATTTATTATATCAAACTTCAAATCCAAATATCCAATACTCCAGTTGGACTTACGATTACTCTCAGATCTGGTAGTTGTTATTGTGTCTGCAACTTGTGGCGGCATTGCTTTTGCTTGTGCAGGACAACCATTCATCACAAGGATCCTTCCATATTATAGTGCATTTTTTGCACAGGTTATTACTGGATATCTACTGGCTGGATCTGTTATTGGACCTGGCGGATTTAACTTCATCAGTGAAATGGTGCAAGTAGAAACTGTGGCCCAGTTTGGTCTTCGAGTTGTTAGAGCCGTTGCTGTTTTAGGAGGACTCCTTCAAATCGTCCTATTTATGTGCCTCTGCGGAATCACTGCTACGTTATGTGGTGGAAAGGGCTCTGATGGAGTATTGGTCGGCGCATTCCTTTCCATGTCTTCAACAGCAGTGGTGTTGAAGTTTTTGAGGGAGAAGAATGCAACTAATGCTCTTCATGGCCAAGTCACCATTGGCATGCTTATTTTGCAGGATTGTGCTGTTGGCTTGCTGTTTGCTTTGCTTCCCGTTCTCGGTGGAACTTCTGGTCTTCTCCAAGGAGTTTTATCCATGTCTAAAGTGTTGGTGGTGTTGATAGCGTTTTTGGCTGTTTTAACATTGTTGTCTCGCACTTGTGTTCCTTGGTTACTTAAACTGATGATAAGTCTATCATCCGAGGTTGATTTTGTTCTTATGCAGACTAATGAACTCTATCAATTAGCATCAGTTGCGTTTTGCTTGCTTGTAGCTTGGTGTAGCGATAAGCTGGGATTAAGTCTAGAATTGGGTTCCTTTGCTGCTGGAGTGATGATATCCACAACTGATCTTGCTCAACATACATTAGAACAAGTTGAACCCATCCGGAACTTCTTTGCTGCCCTTTTCCTGGCCAGCATTGGGATGCTGATCCATGTTCATTTTCTCTGGAGCCATGTTGATATATTACTAGCATCTGTTATTCTGGTCGGGTTGTCTTTGGCTCAAATCGGAGAATTCGCCTTTGTACTTCTTAGTCGAGTTTCTAATCTCCATCTAGTTGAGGGGAAATTATATTTGCTACTTATTGGGACTACCACTCTAAGCCTGGTAGCGACTCCTTTATTATTCAAGCTGATTCCTGCTGTAGTGCAGATGGGTATTCTTTTACGGTGGTTCTCACATGATACCTCTGTAGAGATTGGATTTAAAGGAGATAACCTCCGCCCAGAGAGTGGCAAGCAGCGTGTCATGGTGATCGTCCAAGGATCACATGATTTATGA 1707 43.12 MPTMSRAPSLSELSLLILCSALFVSALSFVALSLPEFTDVSLSNSTLESNNASLSRNKEGSFADIIDRALQNEFKESDQNEATDAGSFNNRVTEQQAVLETVARVKPKKNDTKEEKPFQLHHVFNLDNDNRAEDTPTLIDRRDNVFIISNFKSKYPILQLDLRLLSDLVVVIVSATCGGIAFACAGQPFITRILPYYSAFFAQVITGYLLAGSVIGPGGFNFISEMVQVETVAQFGLRVVRAVAVLGGLLQIVLFMCLCGITATLCGGKGSDGVLVGAFLSMSSTAVVLKFLREKNATNALHGQVTIGMLILQDCAVGLLFALLPVLGGTSGLLQGVLSMSKVLVVLIAFLAVLTLLSRTCVPWLLKLMISLSSEVDFVLMQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWSHVDILLASVILVGLSLAQIGEFAFVLLSRVSNLHLVEGKLYLLLIGTTTLSLVATPLLFKLIPAVVQMGILLRWFSHDTSVEIGFKGDNLRPESGKQRVMVIVQGSHDL 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33154470 33161365 - Bda002638.2 Bda01g00616 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00616 568 PANTHER K(+) EFFLUX ANTIPORTER 6 469 567 - -
Bda01g00616 568 PANTHER K(+) EFFLUX ANTIPORTER 6 16 471 - -
Bda01g00616 568 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 469 567 IPR045158 GO:0015386|GO:0071805|GO:1902600
Bda01g00616 568 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 16 471 IPR045158 GO:0015386|GO:0071805|GO:1902600
Bda01g00616 568 Gene3D - 161 527 IPR038770 -
Bda01g00616 568 Pfam Sodium/hydrogen exchanger family 170 471 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00616 Bda-Chr1:33154470 Bda06g00656 Bda-Chr6:9124956 0 dispersed
Bda01g00616 Bda-Chr1:33154470 Bda13g01606 Bda-Chr13:39592533 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00616 - - csv:101217282 785.793