Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00621 ATGTCGAAGATGAAACATCTTCTGAAAAAGCTTCACATAGGTGGGGGTTTGAACGAGCACCAAAGGTTGGGGGAAACCCGTCAAGAGATCAGCCCGAACCCGACTAGTAATTCAACAGTTTCATCGTCTTCGGGTTCATCGTCGACTCCGGCGTCGGTTTCTTTGGGGGCAATGGATAGGTTTGGTGTTGCTGAATCTGTCGCCGATCGGAGTTCTGAGGACTTCAATTTCTTGGAGGAGGAGTTTCAGATGCAATTGGCTTTGGCAATTAGCGCCTCAGATCCTGCTGCCAGAGAGGATCCTGAGTCAGCTCAGATCGATGCCGCAAAGCGGATTAGTCTCGGCTGTTTTCCTTCTGTATCTGACAGCCATGCCTTAGTTGAACTCTTGTCGCTTCAGTATTGGAGTTACAATGTTGTAAATTATGATGAAAAAGTGTTGGATGGCTTTTATGATATACATTGCACAACCGGAAATTCATTTAGCCAAGGGAAGATGCCATTGTTGGTGGATCTTCAAGCAACTTTGGTTTCTAGTGATGTTAATTATGTACTAGCTGATAGGATTAATCTTCCTTGTATGCTGGTCAAAGGAAGCCACTATATTGGCACAGATGATGGAGCTGTAAACTTGATTAAAGTGGTTGGAGAAAGTGAATACATTATTGATTTGATGGGTGCTCCTGGGACGCTAATCCCATCTGAGCTACCCAGCATGAACCGACTGAGGAAATTTTATGCAATCGCAACAGAGTTACCTGAAATTGGTAACCTAACGTCCAATGAAGCATCCTCATTTGGAGGTATAAAATCAATCAAGAATTGCAGAGATTCTGTTCTTCAAATTCAAAATGAGATTGATGATGGGTTTGGAGAGCTTTCCGAGTTGCAAAATGACCCAGAAAGCACATCAGATATCTGTGGAAAAAGATCTTCTGCCCAAAAGAAGAAAGTTAAAAATGTTTCCAAGTATGTAATATCTGCAGCAAAGAATCCAGAATTTGCTCAAAAACTACATGCTGTTTTGTTAGAGAGTGGCGCATCTCCTCCTCCTGATTTGTTTGCAGATATAGACTCACAAGGCCCTTTTGAAACAAAAGAGCTACAGAAAATCCATTCATTCAATGGAAAAGATGTTGATATATGTCAGAGCAAGTCCCAAGACTTGTCAGCAAGCGATGATCAGACACTTGCTGCTAGTATAAATGAGTTGCTAGACAATGTTTCCTTTGAAAGGAAACCAAAACGGTGTGCTGAGATATTAATTGAACAACAAAGAGAATCGGATCTGTGGAATCATGACGTTTCTCGATGTGGCACTACAAGTGAGAATTTTATGCCTCTGGGTGGTGGAATCTATGAACGGATCCAAAGAGATGCTATTGGTGGAGGAACTGCTGATGTCGCTGTGAAGAAGTTTTTGGACCAAGATCTTTCTGGTGATGCATTGGCTCAGTTAAGGACAGAAGTTGAAATCATGTTAAGACTGAGGCATCCCAATGTTGTGCTTTTTATGGGGGCGGTTACTCGTCCTCCACATTTCTCTATCCTGACAGAGTTTCTTCCGAGGGGAAGTTTGTATAGGTTGCTGCATCGGTCCAACTCCCAACTTGATGAGAAGAGAAGGTTGAGAATGGCTCTTGACGTGGCCAAGGGAATGAATTATTTGCACACAAGTCATCCAACTATTGTTCATCGAGATTTAAAGTCTCCAAATCTCCTTGTTGATAAAAACTGGGTTGTTAAGGTTTGTGATTTTGGTTTGTCACGCATAAAGCTCCATACTTTTCTTTCTTCGAAGTCAACTGCTGGAACGTATAAGCATGATTTTCATAAATGTGATATGATATTAATTTGGCTTGATGAATTGCAGCCGGAATGGATGGCCCCAGAAGTTTTGAGGAACGAGCCAGCTAACGAGAAGTGCGATGTGTACAGTTTTGGTGTGATATTGTGGGAGTTGGCTACTTGCTCTATACCATGGAAAGGTTTGAACCCAATGCAAGTTGTGGGAGCTGTTGGATTCCAAGATAGGCGTCTGGAGATTCCAGATTATGTCGATCCAACTGTTGCACAAATCATGTGTGATTGTTGGCGAACGGAGACACACTTGAGGCCTTCGTTCTCTCAACTTATGGTCCGTCTGAGGCGACTTCAGCGTCTTGTTGTCAATTCTTGA 2178 42.61 MSKMKHLLKKLHIGGGLNEHQRLGETRQEISPNPTSNSTVSSSSGSSSTPASVSLGAMDRFGVAESVADRSSEDFNFLEEEFQMQLALAISASDPAAREDPESAQIDAAKRISLGCFPSVSDSHALVELLSLQYWSYNVVNYDEKVLDGFYDIHCTTGNSFSQGKMPLLVDLQATLVSSDVNYVLADRINLPCMLVKGSHYIGTDDGAVNLIKVVGESEYIIDLMGAPGTLIPSELPSMNRLRKFYAIATELPEIGNLTSNEASSFGGIKSIKNCRDSVLQIQNEIDDGFGELSELQNDPESTSDICGKRSSAQKKKVKNVSKYVISAAKNPEFAQKLHAVLLESGASPPPDLFADIDSQGPFETKELQKIHSFNGKDVDICQSKSQDLSASDDQTLAASINELLDNVSFERKPKRCAEILIEQQRESDLWNHDVSRCGTTSENFMPLGGGIYERIQRDAIGGGTADVAVKKFLDQDLSGDALAQLRTEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRSNSQLDEKRRLRMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRIKLHTFLSSKSTAGTYKHDFHKCDMILIWLDELQPEWMAPEVLRNEPANEKCDVYSFGVILWELATCSIPWKGLNPMQVVGAVGFQDRRLEIPDYVDPTVAQIMCDCWRTETHLRPSFSQLMVRLRRLQRLVVNS 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33212770 33221220 - Bda002643.1 Bda01g00621 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00621 725 MobiDBLite consensus disorder prediction 25 52 - -
Bda01g00621 725 ProSiteProfiles Protein kinase domain profile. 442 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00621 725 SMART serkin_6 442 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00621 725 Pfam Protein tyrosine and serine/threonine kinase 462 714 IPR001245 GO:0004672|GO:0006468
Bda01g00621 725 Gene3D Phosphorylase Kinase; domain 1 447 521 - -
Bda01g00621 725 Gene3D Transferase(Phosphotransferase) domain 1 523 723 - -
Bda01g00621 725 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 466 719 - -
Bda01g00621 725 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 70 178 - -
Bda01g00621 725 Pfam Ethylene-responsive protein kinase Le-CTR1 128 180 - -
Bda01g00621 725 Pfam Ethylene-responsive protein kinase Le-CTR1 184 232 - -
Bda01g00621 725 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 184 235 - -
Bda01g00621 725 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 304 386 - -
Bda01g00621 725 SUPERFAMILY Protein kinase-like (PK-like) 467 719 IPR011009 -
Bda01g00621 725 PANTHER OS06G0232100 PROTEIN 184 235 - -
Bda01g00621 725 PANTHER OS06G0232100 PROTEIN 466 719 - -
Bda01g00621 725 PANTHER OS06G0232100 PROTEIN 70 178 - -
Bda01g00621 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Bda01g00621 725 CDD STKc_MAP3K-like 467 715 - -
Bda01g00621 725 MobiDBLite consensus disorder prediction 27 52 - -
Bda01g00621 725 PANTHER OS06G0232100 PROTEIN 304 386 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00621 Bda-Chr1:33212770 Bda08g01026 Bda-Chr8:21310137 4.78E-14 dispersed
Bda01g00621 Bda-Chr1:33212770 Bda11g01805 Bda-Chr11:53078072 7.86E-20 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69422 PF07714 PK_Tyr_Ser-Thr 3.40E-56 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00621 K04424 - thj:104799167 553.903