Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00627 ATGGGTGCTTCAGGAAAATGGGTTAAATCTCTTATGGGTTTCAGAAAGCCAGACAAGGAAGAACAAGAAAAGCAGTGTGGTAAGAGTACGAAATGGAGGCTATGGAGAAACCCATCAAGTGATTCAGGCTCTTCTTGGAAAGGCTTCAAAGGAGGTCGTAGAGCAGCGTCTGAGGGCTCAAATTCTCCACGAGCAGCTGATGCTTTTACAGCGGCCCGGGCTGCAGTACTTCGAGCTCCTCCTAAAGATTTTAAGGTAGTGAGGCAAGAATGGGCGGCTATTCGAATCCAAACTGCCTTTCGTGGTTTCCTGGCAAGACGCGCGTTGAGGGCGTTGAAAGGAGTGGTGAGGCTTCAGGCTCTGGTTCGTGGTCGGCTGGTGAGAAAGCAAGCGGCCGTGACGCTGAGATGCATGCAAGCCCTTGTTCGAGTCCAGGCTCGAGTGAGGGCTCGTCGAGTAAGAATGTCTACGAAGGGTCAAGCCGTTCAACAAATAATAACCGAAAATCGAACGAAGGCCGATCCCTTGAAACAGGCCGAGCAATGGAAGTCAACTCCCTCTGCCATTTCTAGAACTAATGCCTCGTTGTCGTCTGCTAAGAATCAAGAGTTTGATAAGAACAGCTGGGGATGGAGCTGGTTAGAGAGATGGATGGCTGCCAAGCCTTGGGAAACCAGGCTGATGGAACAACCTCAGGATGATTCACTACCTTCGAAGACCTTCATCGATTCTTCTTCCGGTAAACAGTCGAAAGAGGTTGAATCTTCTTGCTACGTAAAAGTCAGAAAAAACAACATTTCTACTCGAATTTCTGCTAAACCTCCTCAAATAATCCAAGTTCATCGGTCATCGTCGAGCCCGAGTTCTGATTTTCGATATGACGAGAGCTCAGCTTCGTCCTCGTTTTGCACCTCCATAACTCCGGCTTCCTGCAACACTTTAAAGACTAGTGAAAGAACAGAAGACAGCTCGAGAAATCATCCGAGTTACATGAACTTGACTGAATCAACAAAAGCGAAACAGAAAAGAGGTGGTTATTCGCCTCGTAGAAATCAAATGCAATCGAGGGACGAGTTCATCAACAGTTCGGCAGATTTCTCAAATGAGGATTCCAAAAGTAGTGCTGGCTCTGACCCTTCTGTCAATTTATTCAAGCCACTGGTATTTCCGAATCGATCTGGCAAGAGTGCCATGAAAGCAAGATGA 1206 47.35 MGASGKWVKSLMGFRKPDKEEQEKQCGKSTKWRLWRNPSSDSGSSWKGFKGGRRAASEGSNSPRAADAFTAARAAVLRAPPKDFKVVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSTKGQAVQQIITENRTKADPLKQAEQWKSTPSAISRTNASLSSAKNQEFDKNSWGWSWLERWMAAKPWETRLMEQPQDDSLPSKTFIDSSSGKQSKEVESSCYVKVRKNNISTRISAKPPQIIQVHRSSSSPSSDFRYDESSASSSFCTSITPASCNTLKTSERTEDSSRNHPSYMNLTESTKAKQKRGGYSPRRNQMQSRDEFINSSADFSNEDSKSSAGSDPSVNLFKPLVFPNRSGKSAMKAR 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33266195 33268002 - Bda002648.1 Bda01g00627 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00627 401 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Bda01g00627 401 SMART iq_5 111 132 IPR000048 GO:0005515
Bda01g00627 401 SMART iq_5 88 110 IPR000048 GO:0005515
Bda01g00627 401 MobiDBLite consensus disorder prediction 231 248 - -
Bda01g00627 401 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 175 400 - -
Bda01g00627 401 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 166 - -
Bda01g00627 401 MobiDBLite consensus disorder prediction 32 46 - -
Bda01g00627 401 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Bda01g00627 401 PANTHER IQ-DOMAIN 5-RELATED 175 400 - -
Bda01g00627 401 Gene3D - 90 131 - -
Bda01g00627 401 PANTHER IQ-DOMAIN 5-RELATED 1 166 - -
Bda01g00627 401 MobiDBLite consensus disorder prediction 1 63 - -
Bda01g00627 401 MobiDBLite consensus disorder prediction 314 401 - -
Bda01g00627 401 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Bda01g00627 401 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Bda01g00627 401 MobiDBLite consensus disorder prediction 12 30 - -
Bda01g00627 401 MobiDBLite consensus disorder prediction 326 380 - -
Bda01g00627 401 MobiDBLite consensus disorder prediction 229 248 - -
Bda01g00627 401 MobiDBLite consensus disorder prediction 270 292 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00627 Bda-Chr1:33266195 Bda01g01331 Bda-Chr1:48956185 3.42E-42 dispersed
Bda01g00627 Bda-Chr1:33266195 Bda04g00916 Bda-Chr4:58942813 5.97E-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00627 - - qsu:112015613 466.848