Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda01g00634 | ATGTGCTTAGATACGGCGGAGGATGGTTCAGCCGCAGAAATTCACCTTCCAGCTGAAATCGATTGGCACATGCTTGACAAATCCAAGTTCTTCTTCCTCGGCGCCGGTCTATTTTCCGGTGTATCGGCCGCACTTTATCCAATCATCGTTTTGAAGACCCGTCAGCAGGTTTCTCCCACCAAGCTATCCTGCTTCAAAATGTCCTATTCCATCGTAAGACATGAGGGTTTTCGAGGGTTTTACAGAGGTTATGGTACCTCTTTAATGGGAACAATCCCAGCTCGAGCTCTTTACATGGGGTCGCTTGAAATCACCAAGAGTAGCGTCGGCAGTGCGACTGTCAGATTTGGGTTTTCAGATACTTCTGCCATGGCGATGGCTAATGCCGCCGCAGGGTTGACCGCAGCCATGGCGGCTCAACTAGTTTGGACGCCAGTTGATGTAGTGAGCCAGAGACTAATGGTTCAAGGGGGCGGTAAAAACATTGTCCCTTGTCTCAATTCTTGCAGATACAGCAACGGAATCGACGCGTTTAGGAAAATCATCAATGCTGATGGAGTGAGAGGTTTGTACAGAGGATTTGGAATGTCAATAATGACATACGCACCCTCCAATGCAGTTTGGTGGGCTTCTTATTCAGTCGCTTACAAGCACATACTGAATGGTCTCAGGCAGCACAGGATTTCCAAGAACGAGAATAGCGAAGTCGAAGGCAATGGCTATGGCTGGTTTAAGCCGGATTCGAAGACGGTGGTCGGAGTTCAGGGGCTAAGTGCAGCAATGGCGAGTGGAGTCTCTGCAATAATTACAATGCCACTTGATACGATAAAGACGAGATTGCAAGTATTGGATGGGGAAGAAAATGGGCAGAGGCGACCATTAACGGCATTTCAGACTGTAAAAAACTTGGTGAAGGAAGGTGGATTAACGGCTTGTTACAGAGGGTTAGGACTGAGGTGGGCTTCCATGGCTATGTCTGCAACGACGATGATCACTACTTACGAATTTGTCAAACAGCTTTCAGCTAAAAATTAA | 1035 | 47.54 | MCLDTAEDGSAAEIHLPAEIDWHMLDKSKFFFLGAGLFSGVSAALYPIIVLKTRQQVSPTKLSCFKMSYSIVRHEGFRGFYRGYGTSLMGTIPARALYMGSLEITKSSVGSATVRFGFSDTSAMAMANAAAGLTAAMAAQLVWTPVDVVSQRLMVQGGGKNIVPCLNSCRYSNGIDAFRKIINADGVRGLYRGFGMSIMTYAPSNAVWWASYSVAYKHILNGLRQHRISKNENSEVEGNGYGWFKPDSKTVVGVQGLSAAMASGVSAIITMPLDTIKTRLQVLDGEENGQRRPLTAFQTVKNLVKEGGLTACYRGLGLRWASMAMSATTMITTYEFVKQLSAKN | 344 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 33332162 | 33333196 | + | Bda002659.1 | Bda01g00634 | 634 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda01g00634 | 344 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 27 | 108 | IPR018108 | - | |
| Bda01g00634 | 344 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 250 | 340 | IPR018108 | - | |
| Bda01g00634 | 344 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 344 | - | - | |
| Bda01g00634 | 344 | Pfam | Mitochondrial carrier protein | 35 | 108 | IPR018108 | - | |
| Bda01g00634 | 344 | Pfam | Mitochondrial carrier protein | 126 | 219 | IPR018108 | - | |
| Bda01g00634 | 344 | Pfam | Mitochondrial carrier protein | 255 | 343 | IPR018108 | - | |
| Bda01g00634 | 344 | SUPERFAMILY | Mitochondrial carrier | 24 | 337 | IPR023395 | - | |
| Bda01g00634 | 344 | Gene3D | Mitochondrial carrier domain | 23 | 167 | IPR023395 | - | |
| Bda01g00634 | 344 | Gene3D | Mitochondrial carrier domain | 168 | 344 | IPR023395 | - | |
| Bda01g00634 | 344 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN | 1 | 344 | - | - | |
| Bda01g00634 | 344 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 218 | IPR018108 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda01g00634 | Bda03g00133 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00634 | Bda-Chr1:33332162 | Bda10g00867 | Bda-Chr10:43170391 | 3.09E-161 | dispersed | |
| Bda01g00634 | Bda-Chr1:33332162 | Bda03g00133 | Bda-Chr3:1171354 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda01g00634 | K15121 | - | pvy:116141727 | 503.827 |