Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00645 ATGGCAGCGTCGAAAAAACTTTTGACGAAAGGAATCTCAGAGGCGGAAGCAATGGACGTGGAGTTCGCCGAGTGCGATTGCTGCGGGCTGAGGGAGGAGTGCACGCTGCCGTACATAGCCAGAGTGCGGGAGAGGTATCAAGGGCGGTGGATTTGTGGGCTGTGCGCGGAAGCAGTGAAGGACGAATCTCTCCGATCCACGAGAAACATCACCACCGACGAAGCAATCAATCGCCACACCAAGTTCTGCGAGAAATTCAGATCCTCCTCTCCTCCAACAAACTCAACGGAGGAACTCATATCGGCAATGAAGCAGCTACTCCGGAGAACGCTGGACTCTCCGAGAAAGGAAGCCTCTCCTTCGGCATGCCCAGGGCGAGGGATGATCAAGATTTAG 396 54.8 MAASKKLLTKGISEAEAMDVEFAECDCCGLREECTLPYIARVRERYQGRWICGLCAEAVKDESLRSTRNITTDEAINRHTKFCEKFRSSSPPTNSTEELISAMKQLLRRTLDSPRKEASPSACPGRGMIKI 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33473388 33473783 - Bda002671.1 Bda01g00645 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00645 131 Pfam Protein of unknown function (DUF1677) 20 109 IPR012876 -
Bda01g00645 131 PANTHER OS01G0745000 PROTEIN 5 124 IPR012876 -
Bda01g00645 131 PANTHER DUF1677 FAMILY PROTEIN 5 124 - -
Bda01g00645 131 MobiDBLite consensus disorder prediction 111 131 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00645 Bda01g01352 CCT
Bda01g00645 Bda13g01584 CCT
Bda01g00645 Bda01g01352 ECH
Bda01g01352 Bda01g00645 ECH
Bda01g00645 Bda13g01584 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00645 Bda-Chr1:33473388 Bda05g00608 Bda-Chr5:54166869 5.80E-47 dispersed
Bda01g00645 Bda-Chr1:33473388 Bda04g00937 Bda-Chr4:59122786 1.96E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00645 - - ming:122087472 168.318