Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00652 | ATGGGCTATCTGAATTCAGTCCTATGTTCGAGTCAGGTTCATGCTGCCGATGAAGGGCCAGTAAGCGGCGGTGGTCTCAGTTCAAATGGAAAGTTCAGCTATGGATATGCAAGTTCTCCAGGGAAACGGTCTTCAATGGAAGATTTTTATGAGACACGAATAGATGGTGTTGAAGGGGAAATAATAGGCCTCTTTGGGGTTTTTGATGGTCATGGGGGTGCGCGGGCTGCTGAGTATGTGAAGCAAAACTTGTTTAGTAATTTGATCCAGCACCCTAAGTTCATTTCTGATACTAAATCAGCTATAACCGATGCATACATCCACACAGACTCAGAATTTCTAAAATCAGAAAACAATCAGAACAGGGATGCTGGATCAACAGCTTCTACTGCTATTTTAGTCGGTGATCGTTTGCTTGTTGCTAATGTTGGGGATTCCAGAGCTGTTATATGTCGTGGTGGAAATGCAATTGCTGTCTCCCGAGATCACAAACCTGATCAATCAGATGAACGACAACGGATTGAGGATGCTGGAGGATTTGTGGTGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCTTTTGGGGATAGGTTGTTGAAGCAGTATGTTGTAGCTGATCCGGAAATTCAGGAGGAAAAGATCGATAGCTCCCTTGAGTTTCTCATTCTTGCAAGTGATGGACTGTGGGATGTTGTCTCTAACGAGGAGGCTGTTGCGATGATAAAACCAATTCAGGCACCGGAGGAGGCCGCAAAGAGGTTGATGCTGGAAGCATACCAGAAAGGCAGTGCTGATAACATTACCTGTGTGGTTGTTCGTTTTTTGGCCAATCAAGGCGCTTCCTCCTGCGAAACGTCTGCG | 876 | 45.89 | MGYLNSVLCSSQVHAADEGPVSGGGLSSNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIIGLFGVFDGHGGARAAEYVKQNLFSNLIQHPKFISDTKSAITDAYIHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVVWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMIKPIQAPEEAAKRLMLEAYQKGSADNITCVVVRFLANQGASSCETSA | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 33517281 | 33521353 | - | Bda032910 | Bda01g00652 | 652 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00652 | 292 | Pfam | Protein phosphatase 2C | 62 | 272 | IPR001932 | - | |
Bda01g00652 | 292 | ProSitePatterns | PPM-type phosphatase domain signature. | 64 | 72 | IPR000222 | GO:0043169 | |
Bda01g00652 | 292 | CDD | PP2Cc | 32 | 279 | IPR001932 | - | |
Bda01g00652 | 292 | SMART | PP2C_4 | 23 | 277 | IPR001932 | - | |
Bda01g00652 | 292 | SMART | PP2C_SIG_2 | 44 | 279 | IPR001932 | - | |
Bda01g00652 | 292 | ProSiteProfiles | PPM-type phosphatase domain profile. | 33 | 279 | IPR001932 | - | |
Bda01g00652 | 292 | PANTHER | ALPHABET, ISOFORM E-RELATED | 3 | 287 | - | - | |
Bda01g00652 | 292 | Gene3D | - | 25 | 284 | IPR036457 | - | |
Bda01g00652 | 292 | PANTHER | PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C | 3 | 287 | - | - | |
Bda01g00652 | 292 | SUPERFAMILY | PP2C-like | 28 | 279 | IPR036457 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g00652 | Bda03g00114 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00652 | Bda-Chr1:33517281 | Bda07g01926 | Bda-Chr7:36727788 | 4.49E-90 | dispersed | |
Bda08g00230 | Bda-Chr8:2296955 | Bda01g00652 | Bda-Chr1:33517281 | 8.71E-19 | dispersed | |
Bda08g01091 | Bda-Chr8:24200855 | Bda01g00652 | Bda-Chr1:33517281 | 6.73E-26 | dispersed | |
Bda10g00866 | Bda-Chr10:43167648 | Bda01g00652 | Bda-Chr1:33517281 | 6.92E-42 | dispersed | |
Bda11g00553 | Bda-Chr11:5765106 | Bda01g00652 | Bda-Chr1:33517281 | 2.41E-30 | dispersed | |
Bda11g00699 | Bda-Chr11:6937124 | Bda01g00652 | Bda-Chr1:33517281 | 5.33E-46 | dispersed | |
Bda12g00431 | Bda-Chr12:5305956 | Bda01g00652 | Bda-Chr1:33517281 | 6.35E-13 | dispersed | |
Bda14g00146 | Bda-Chr14:997516 | Bda01g00652 | Bda-Chr1:33517281 | 1.50E-47 | dispersed | |
Bda04g00541 | Bda-Chr4:54099893 | Bda01g00652 | Bda-Chr1:33517281 | 1.70E-19 | transposed | |
Bda01g00652 | Bda-Chr1:33517281 | Bda13g01574 | Bda-Chr13:39243086 | 5.57E-53 | wgd | |
Bda01g00652 | Bda-Chr1:33517281 | Bda03g00114 | Bda-Chr3:1021779 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00652 | K17506 | - | tcc:18587664 | 530.02 |