Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00652 ATGGGCTATCTGAATTCAGTCCTATGTTCGAGTCAGGTTCATGCTGCCGATGAAGGGCCAGTAAGCGGCGGTGGTCTCAGTTCAAATGGAAAGTTCAGCTATGGATATGCAAGTTCTCCAGGGAAACGGTCTTCAATGGAAGATTTTTATGAGACACGAATAGATGGTGTTGAAGGGGAAATAATAGGCCTCTTTGGGGTTTTTGATGGTCATGGGGGTGCGCGGGCTGCTGAGTATGTGAAGCAAAACTTGTTTAGTAATTTGATCCAGCACCCTAAGTTCATTTCTGATACTAAATCAGCTATAACCGATGCATACATCCACACAGACTCAGAATTTCTAAAATCAGAAAACAATCAGAACAGGGATGCTGGATCAACAGCTTCTACTGCTATTTTAGTCGGTGATCGTTTGCTTGTTGCTAATGTTGGGGATTCCAGAGCTGTTATATGTCGTGGTGGAAATGCAATTGCTGTCTCCCGAGATCACAAACCTGATCAATCAGATGAACGACAACGGATTGAGGATGCTGGAGGATTTGTGGTGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCTTTTGGGGATAGGTTGTTGAAGCAGTATGTTGTAGCTGATCCGGAAATTCAGGAGGAAAAGATCGATAGCTCCCTTGAGTTTCTCATTCTTGCAAGTGATGGACTGTGGGATGTTGTCTCTAACGAGGAGGCTGTTGCGATGATAAAACCAATTCAGGCACCGGAGGAGGCCGCAAAGAGGTTGATGCTGGAAGCATACCAGAAAGGCAGTGCTGATAACATTACCTGTGTGGTTGTTCGTTTTTTGGCCAATCAAGGCGCTTCCTCCTGCGAAACGTCTGCG 876 45.89 MGYLNSVLCSSQVHAADEGPVSGGGLSSNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIIGLFGVFDGHGGARAAEYVKQNLFSNLIQHPKFISDTKSAITDAYIHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVVWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMIKPIQAPEEAAKRLMLEAYQKGSADNITCVVVRFLANQGASSCETSA 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 33517281 33521353 - Bda032910 Bda01g00652 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00652 292 Pfam Protein phosphatase 2C 62 272 IPR001932 -
Bda01g00652 292 ProSitePatterns PPM-type phosphatase domain signature. 64 72 IPR000222 GO:0043169
Bda01g00652 292 CDD PP2Cc 32 279 IPR001932 -
Bda01g00652 292 SMART PP2C_4 23 277 IPR001932 -
Bda01g00652 292 SMART PP2C_SIG_2 44 279 IPR001932 -
Bda01g00652 292 ProSiteProfiles PPM-type phosphatase domain profile. 33 279 IPR001932 -
Bda01g00652 292 PANTHER ALPHABET, ISOFORM E-RELATED 3 287 - -
Bda01g00652 292 Gene3D - 25 284 IPR036457 -
Bda01g00652 292 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 287 - -
Bda01g00652 292 SUPERFAMILY PP2C-like 28 279 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00652 Bda03g00114 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00652 Bda-Chr1:33517281 Bda07g01926 Bda-Chr7:36727788 4.49E-90 dispersed
Bda08g00230 Bda-Chr8:2296955 Bda01g00652 Bda-Chr1:33517281 8.71E-19 dispersed
Bda08g01091 Bda-Chr8:24200855 Bda01g00652 Bda-Chr1:33517281 6.73E-26 dispersed
Bda10g00866 Bda-Chr10:43167648 Bda01g00652 Bda-Chr1:33517281 6.92E-42 dispersed
Bda11g00553 Bda-Chr11:5765106 Bda01g00652 Bda-Chr1:33517281 2.41E-30 dispersed
Bda11g00699 Bda-Chr11:6937124 Bda01g00652 Bda-Chr1:33517281 5.33E-46 dispersed
Bda12g00431 Bda-Chr12:5305956 Bda01g00652 Bda-Chr1:33517281 6.35E-13 dispersed
Bda14g00146 Bda-Chr14:997516 Bda01g00652 Bda-Chr1:33517281 1.50E-47 dispersed
Bda04g00541 Bda-Chr4:54099893 Bda01g00652 Bda-Chr1:33517281 1.70E-19 transposed
Bda01g00652 Bda-Chr1:33517281 Bda13g01574 Bda-Chr13:39243086 5.57E-53 wgd
Bda01g00652 Bda-Chr1:33517281 Bda03g00114 Bda-Chr3:1021779 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00652 K17506 - tcc:18587664 530.02