Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00668 | ATGGCTCCGGCGACTAACTGGCTCTCGTTCTCTCTATCTCCGGTTGAAATGCTGAGGTCTTCTGCTGAATCTCAGTTTATGCCTTACGACACCTCGTCCACTGCTTCTCATCCCTACTTGATCGATAATATCTACTCAAATGGTACTGCATCTGGTTTGATTGTTCTTTCAGGTTGGGGAAACCACAAACAAGTTCAAGCTTCAAGTAGTATCGCCGATTCACATATTCTGACTAGCTTTATCGACCACAATTGCCAAAACCAAGGAGCACCGAAACTGGAAGACTTTCTCGGTGAGTCGTCGTTAATGGTTCGATATTCCGATAGCCAAACGGAAACTCAAGACTCGTCTTTAACCCAAATCTATGACCATGGTTCAACCTACTTCAACGACCAGCAAGATCTCAAAGCTATTACTGGGTTTCAAGCTTTCTCAGCCAACTCTGGTTCGGAAGTGGATGACTCGGCATCTATCGCTCGGAACCAGCTCGCTTGCGGCGAGTTCGCCGGCCATTCTATTGAGTCGTCCGGCACCGTATTAGCCTTCACTAATTGTTCTACCGGTGCACTGTCACTCGGGGTAGCTCAGAGATCGGAAACAGCGGTTGTTCCGATAGAATCTGATAGCTCGAAGAAGATTGTTGATACTTTTGGCCAGCGAACTTCGATTTACAGAGGCGTTACTCGACACAGATGGACTGGTAGATACGAAGCCCATCTATGGGATAACAGTTGTCGAAGAGAAGGACAGGCTAGGAAAGGGCGTCAAGGTGGATATGACAAAGAAGATAAGGCAGCGAGGGCTTATGATCTGGCAGCTTTGAAATACTGGGGTCCCACTGCCACTACCAACTTTTCTGTTTCTAATTACACCAAAGAACTGGAGGAGATGAAACATGTGACTAAGCAAGAATTCATTGCTTCTCTTCGAAGGAAAAGTAGTGGGTTTTCAAGGGGAGCTTCGATTTATAGAGGCGTGACAAGGCATCATCAACAGGGAAGGTGGCAAGCGAGAATAGGCCGAGTTGCTGGGAATAAGGATCTGTACCTCGGGACATTTGCGACCGAAGAGGAAGCGGCTGAAGCTTACGATATCGCAGCAATAAAGTTCAGAGGCTTAAATGCGGTCACAAACTTCGAGATGGGACGGTACGATGTGGAAGCAATTTCAAAGAGCAATCTCCCCATAGGAGGAGCTGCAAAAAGGTTAAAGCTCTCACTCGAATCCGAGCAGAAGCCATCCATTATGCACCATAATTTACAGCCATCGAGCATTAGTGGCGGAAACAACATAAGTTTCGGTGCAATTCAACCTGTTCCGGCTATCTCACGTGGACTGCCGTTTGAAGCTTCCACTTCTCCAATGCTTTATCATCATAATCTCTTCCACCACCTCCAACCCAACAGCACCAGCACTCTTGGTTCGACTTCTAACCCTACTATGGCAGCTCCAACGAATGTGATGCCACGGCAGCCAGAATTTTATGTGTGGCCTCACCAGTCCTATTGA | 1509 | 47.25 | MAPATNWLSFSLSPVEMLRSSAESQFMPYDTSSTASHPYLIDNIYSNGTASGLIVLSGWGNHKQVQASSSIADSHILTSFIDHNCQNQGAPKLEDFLGESSLMVRYSDSQTETQDSSLTQIYDHGSTYFNDQQDLKAITGFQAFSANSGSEVDDSASIARNQLACGEFAGHSIESSGTVLAFTNCSTGALSLGVAQRSETAVVPIESDSSKKIVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGPTATTNFSVSNYTKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGLNAVTNFEMGRYDVEAISKSNLPIGGAAKRLKLSLESEQKPSIMHHNLQPSSISGGNNISFGAIQPVPAISRGLPFEASTSPMLYHHNLFHHLQPNSTSTLGSTSNPTMAAPTNVMPRQPEFYVWPHQSY | 502 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 33698071 | 33701484 | + | Bda002696.1 | Bda01g00668 | 668 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00668 | 502 | CDD | AP2 | 321 | 380 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | Pfam | AP2 domain | 322 | 372 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | Pfam | AP2 domain | 223 | 278 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | CDD | AP2 | 222 | 288 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | ProSiteProfiles | AP2/ERF domain profile. | 322 | 380 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | Gene3D | AP2/ERF domain | 322 | 381 | IPR036955 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | Gene3D | AP2/ERF domain | 223 | 288 | IPR036955 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 5 | 479 | - | - | |
Bda01g00668 | 502 | SMART | rav1_2 | 223 | 292 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | SMART | rav1_2 | 322 | 386 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 | 5 | 479 | - | - | |
Bda01g00668 | 502 | PRINTS | Ethylene responsive element binding protein signature | 224 | 235 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | PRINTS | Ethylene responsive element binding protein signature | 362 | 382 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | ProSiteProfiles | AP2/ERF domain profile. | 223 | 286 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00668 | 502 | SUPERFAMILY | DNA-binding domain | 321 | 381 | IPR016177 | GO:0003677 | |
Bda01g00668 | 502 | SUPERFAMILY | DNA-binding domain | 222 | 288 | IPR016177 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00668 | Bda-Chr1:33698071 | Bda07g01133 | Bda-Chr7:13478377 | 8.96E-118 | dispersed | |
Bda01g00668 | Bda-Chr1:33698071 | Bda11g01553 | Bda-Chr11:48349637 | 1.64E-108 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15382 | PF00847 | AP2 | 1.10E-08 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00668 | K09285 | - | jre:108990656 | 707.597 |