Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda01g00677 | ATGCAGCTTTATCATCATCCATTCTCTTTGGACAGCCAAAAAGTGAGACTTGCTTTAGAAGAAAAAGGCATTGATTACACGTCTTACCATGTCAATCCTATTACAGGTAAGAACTTGGATTCCACATTCTTCAGGATGAACCCAACAGCCAAGATCCCTGTTTTCCAGAATGGTGCTCACATCATGTACGACACTATTGAAATTATCCAGTACATTGAAAGAATTTCTATTGTCACTTCGGGTAGCGTGGACGAAAAGGCGACGAGCAGTAGCCAAGTCGTCGTCCAATGGATGCAGAAAATACAAGATTGGAATCCTAAATATTTCACCCTTAACTACATACCCGAAAAGTATCGACTCATGGTCACAAAGTTCTTGAGGCGCGTAATGATAGCTCGACTGGCTGAATCGCCCGATCTTGCACCTGCTTACCACCGCAAACTAAGACAAGCCTATGAGACGGAAGACAAGTTGAAAAATTCAGATGCTGTAAAACAAAACATACAACACCTAAATCAACTTCTGGACGAAGTCGAAGCAAAGTTGTCGGAAAGTGCATATCTAGGTGGAGAAGAGTTTTCAATGGCAGATGTAATGCTCATTCCGGTCCTATCTCGGATAGTGATATTGAAGTTGGAAGAGTACATAAAAATCAGGCCAAATATTGCGGAGTATTGGTTGGTGGTGCAGGAGAGGCCAAGCTACAAGAAGGTGATCGGAAGGTACTTCAAGGGGTGGAGAAAGCACAAGACTCTAGTCAAAACCTGGTTTTTTGTACATTTCAGAAGCTTGCTGAAGAGGTATTGA | 807 | 42.38 | MQLYHHPFSLDSQKVRLALEEKGIDYTSYHVNPITGKNLDSTFFRMNPTAKIPVFQNGAHIMYDTIEIIQYIERISIVTSGSVDEKATSSSQVVVQWMQKIQDWNPKYFTLNYIPEKYRLMVTKFLRRVMIARLAESPDLAPAYHRKLRQAYETEDKLKNSDAVKQNIQHLNQLLDEVEAKLSESAYLGGEEFSMADVMLIPVLSRIVILKLEEYIKIRPNIAEYWLVVQERPSYKKVIGRYFKGWRKHKTLVKTWFFVHFRSLLKRY | 268 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 33954955 | 33955950 | - | Bda002714.1 | Bda01g00677 | 677 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda01g00677 | 268 | Pfam | Glutathione S-transferase, N-terminal domain | 3 | 74 | IPR004045 | - | |
| Bda01g00677 | 268 | CDD | GST_N_family | 1 | 73 | - | - | |
| Bda01g00677 | 268 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 120 | 252 | IPR010987 | - | |
| Bda01g00677 | 268 | SUPERFAMILY | Thioredoxin-like | 1 | 74 | IPR036249 | - | |
| Bda01g00677 | 268 | SFLD | Main (cytGST) | 1 | 232 | - | - | |
| Bda01g00677 | 268 | SUPERFAMILY | GST C-terminal domain-like | 134 | 242 | IPR036282 | - | |
| Bda01g00677 | 268 | PANTHER | GLUTATHIONE S-TRANSFERASE TCHQD | 1 | 268 | IPR044617 | GO:0004364 | |
| Bda01g00677 | 268 | SFLD | Glutathione Transferase (cytosolic) | 1 | 232 | IPR040079 | - | |
| Bda01g00677 | 268 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 80 | IPR004045 | - | |
| Bda01g00677 | 268 | Pfam | Glutathione S-transferase, C-terminal domain | 163 | 214 | - | - | |
| Bda01g00677 | 268 | Gene3D | Glutaredoxin | 1 | 75 | - | - | |
| Bda01g00677 | 268 | Coils | Coil | 265 | 268 | - | - | |
| Bda01g00677 | 268 | Coils | Coil | 161 | 181 | - | - | |
| Bda01g00677 | 268 | Gene3D | - | 133 | 239 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00677 | Bda-Chr1:33954955 | Bda06g00110 | Bda-Chr6:1710126 | 0 | dispersed | |
| Bda01g00677 | Bda-Chr1:33954955 | Bda12g00050 | Bda-Chr12:336677 | 4.08E-08 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda01g00677 | K22077 | - | pvy:116140169 | 405.986 |