Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00689 ATGTCTTTAGTAAGATCTGCAGAGTCATCTGTTATGGCGTATGGAACTTCCAACTTTCACTCAATGAAGGGGAGTAATAATGCTACAAGCCTGTCCATCCAGACACTTGACTCCGACGAGCAAAAGGCAATGTACACGTTTGATTCTTACAGCAGTGAGAGCTATGAGAACTATTTCCTCGATTCTCCAACAGAAGAACCTATTGAAGTATCATACTCCACGATCTATAGCCGTTCATTTCACCCACAAGTGGATTCCTATCAGCTACGAGCAGAAAGCCCCTTTGACCCTTCGCTTGTATCCATCAGACAGCATAGCTCTTATCCATTGAATGCGGAAAAAGCTTACGTCGAAAGGCGAAGTCCAGATCTAGTTGACTTTGATGAAGACCAGATGAGACTGAAATTACAAGAATTGGAGAGAGCACTCCTTGGTGATACTGATGTTACTGATTATGATGACGAAGCCTTTATCACGGCCAAAGGCATGGAAATTGATGGAGAATGGAGTGATTCCATTAGGAATGAATTGAGTCATGATTCGCCCAAGGAATCTTCATCTTCCGATTCCTATCTGAGTGGTATTAGCAGCGAAAAGGACACATCACAAGTAATTTTGCAGAAACCGAAGCAATTGCTTTTAGATTGTGCGGCTATGATCTCAGAAGGAAACGTCGAAGAGGCATCAGCCATGATAAGCCACCTACGCCAGATGGTTTCCATCCAAGGAGATCCGCCTCAGAGGATTGCTGCTTACATGGTGGAAGGTCTTGTAGCTCGTATGGCTGACTCCGGAAAATTTCTGTACAAAGCTTTGAAATGCAAAGAGGCTACAACTTCTGATCGGCTGGCAGCTATGCAAATTCTCTTCGAGGTTTGCCCTTGCTTTAAATTTGGATTTATGACTGCCAACTTTTCTATCTTAGGGGCGTGCAAAGATGAGAAAAGAGTTCACATAATAGATTTTGACATAAACCAAGGGACTCCATACATGGCATTGATTCAAATGCTGAAGACTCTACCGGGCAAGCCGCCTCACCTGAGGTTAACAGGGGTCGATGATCCTGAGACTATTCAACGTCCTGTTGGGGGCCTCAAAAACATCGGACAAAGGCTTGAAATGCTGGCAAAAACACTGGGAGTGTCATTCGAGTTTCAAGCCGTGGCCTCCAAGACTTCGATAGTGACGCCCTCGAAGCTAGACTGTCGACCAGGAGAAGCAGTCATTGTGAATTTTGCGTTTCAACTTCACCACATGCCAGACGAAAGTGTTTCAACGATAAACATGCGGGACCAGCTTCTTCGGATGGTTAAAAGCTTGAAGCCAAAACTAGTGACAGTTGTTGAGCAAGACCTCAACACAAACACTAACCCGTTTTTCACAAGATTCATAGAAGCTTACGATTACTATTCGGCCATATTCGAGTCTCTCGATGTAACACTCCCTCGAGAGAGTCAGGATCGGATGAATGTGGAGAGGCATTGTCTTGCAAGGGACATAGTTAATATTGTGGCATGTGAAGGCGAGGAAAGAATAGAACGATATGAAATGGCCGGAAAATGGAGGGCGAGGATGGCAATGGCGGGATTTACTTCTTGTGCAGTGAGCTCGAATACGATTGAATCGATCAAGAAACTTACCGGGGAGTATTGTGACAAGTTCAAAATGAAGGAGGAAATGGGCGCCCTTCACTTTGGGTGGGAAGACAAGAACTTGATCGTTGCCTCTGCGTGGAGGTGA 1740 44.94 MSLVRSAESSVMAYGTSNFHSMKGSNNATSLSIQTLDSDEQKAMYTFDSYSSESYENYFLDSPTEEPIEVSYSTIYSRSFHPQVDSYQLRAESPFDPSLVSIRQHSSYPLNAEKAYVERRSPDLVDFDEDQMRLKLQELERALLGDTDVTDYDDEAFITAKGMEIDGEWSDSIRNELSHDSPKESSSSDSYLSGISSEKDTSQVILQKPKQLLLDCAAMISEGNVEEASAMISHLRQMVSIQGDPPQRIAAYMVEGLVARMADSGKFLYKALKCKEATTSDRLAAMQILFEVCPCFKFGFMTANFSILGACKDEKRVHIIDFDINQGTPYMALIQMLKTLPGKPPHLRLTGVDDPETIQRPVGGLKNIGQRLEMLAKTLGVSFEFQAVASKTSIVTPSKLDCRPGEAVIVNFAFQLHHMPDESVSTINMRDQLLRMVKSLKPKLVTVVEQDLNTNTNPFFTRFIEAYDYYSAIFESLDVTLPRESQDRMNVERHCLARDIVNIVACEGEERIERYEMAGKWRARMAMAGFTSCAVSSNTIESIKKLTGEYCDKFKMKEEMGALHFGWEDKNLIVASAWR 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34048835 34050574 + Bda002725.1 Bda01g00689 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00689 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 578 IPR005202 -
Bda01g00689 579 MobiDBLite consensus disorder prediction 174 195 - -
Bda01g00689 579 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 14 578 IPR030011 GO:0003700|GO:0005634
Bda01g00689 579 Pfam GRAS domain family 210 579 IPR005202 -
Bda01g00689 579 ProSiteProfiles GRAS family profile. 200 579 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00689 Bda03g00027 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00689 Bda-Chr1:34048835 Bda06g00409 Bda-Chr6:6245748 3.99E-143 dispersed
Bda09g01510 Bda-Chr9:46851450 Bda01g00689 Bda-Chr1:34048835 5.68E-64 dispersed
Bda12g00952 Bda-Chr12:40595240 Bda01g00689 Bda-Chr1:34048835 1.44E-59 dispersed
Bda13g01541 Bda-Chr13:38644026 Bda01g00689 Bda-Chr1:34048835 3.68E-40 dispersed
Bda01g00689 Bda-Chr1:34048835 Bda03g00027 Bda-Chr3:453384 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15387 PF03514 GRAS 2.10E-131 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00689 - - qsu:111984328 782.326