Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00700 CTCTCTGCTCTGATGGCGTTAGATTTCATCCCAGGATTCCCCCCTAACATCGAAGGTCGGCAGATGGCTCTACAGGAAGCTGCCTCTCAAGGCATCAAAAGCATGGAGCGCCTCATCTACGCCCTGTCTCAGAAGAAGCAATCTACTCACTCGGACTGCGCCGATCTCACCGACGCTACCGTTTCGAAGTTCAAAAATGTCATTTCATTTCTCAACCGGACCGGTCATGCGCGGTTCAGGCGCGGTCCGACTTTCTCTCCCTCCTCTTCCGCGTCTCCCTCCGTCCCTCACGCACAGACTTTGAACGTCACACCGGCTACTTTTACTTCTCCGGTGACTGTCTCTACCGCTCCAGTTGTTCCTCCGGCGAGCTTCGTTCAGCCTCAGCCGCAGAGCATGACCCTTGATTTCACGAAACCTAGTATTTTGAGCTCAAATGTTAAAAGTGCCGAGCTCGAGTTCACTAAAGAGAGCTTCAGCGTCTCGTCCAGTTGCTCGTTCATGTCGTCAAACATCACCGGAGAGGGGAGCGTATCGAACGGAAAGCTCGGATCTTCGATCTTCCTGTCCACCGCACCAACAGTCTCCGCCGGGAAGCCGCCTCTCTCAGCGGGGCTCTACAAGAAGAGGTGTCACTCCCACTCGCTCTCGCTCTCCCACTCCCACTCCCACTCCCACTCCGAAAACGTGTCCGGCAAACTTTCCGGTTCAACTTCGGCTTCCGGCAAGTGCCACTGCTCCAAAAAAAGGAAGAATAGAGTAAAGAAAACTATCAGAGTGCCCGCGGTGAGTTCAAAGATAGCCGACATTCCGCCGGACGAGTACTCGTGGAGAAAATACGGGCAGAAGCCTATCAAAGGGTCACCATACCCACGGGGATACTACAAGTGCAGTACAATCAGAGGATGCCCGGCTAGGAAACACGTAGAGAGGGCCACGGATGATCCGGCAATGCTGATCGTAACGTACGAGGGGGAGCACCGTCATGGGCAGGGCGGGATGGAGGAGAACGCCGGTGGGTTGGTGTTCGAGTCAACGTGA 1041 54.95 LSALMALDFIPGFPPNIEGRQMALQEAASQGIKSMERLIYALSQKKQSTHSDCADLTDATVSKFKNVISFLNRTGHARFRRGPTFSPSSSASPSVPHAQTLNVTPATFTSPVTVSTAPVVPPASFVQPQPQSMTLDFTKPSILSSNVKSAELEFTKESFSVSSSCSFMSSNITGEGSVSNGKLGSSIFLSTAPTVSAGKPPLSAGLYKKRCHSHSLSLSHSHSHSHSENVSGKLSGSTSASGKCHCSKKRKNRVKKTIRVPAVSSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTIRGCPARKHVERATDDPAMLIVTYEGEHRHGQGGMEENAGGLVFEST 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34258875 34261930 + Bda002737.1 Bda01g00700 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00700 346 MobiDBLite consensus disorder prediction 220 243 - -
Bda01g00700 346 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 345 IPR044810 GO:0003700
Bda01g00700 346 MobiDBLite consensus disorder prediction 217 249 - -
Bda01g00700 346 ProSiteProfiles WRKY domain profile. 266 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g00700 346 SUPERFAMILY WRKY DNA-binding domain 269 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda01g00700 346 Pfam WRKY DNA -binding domain 273 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g00700 346 PANTHER WRKY TRANSCRIPTION FACTOR 17-RELATED 20 345 - -
Bda01g00700 346 Pfam Plant zinc cluster domain 208 269 IPR018872 -
Bda01g00700 346 SMART WRKY_cls 271 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g00700 346 Gene3D WRKY domain 255 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00700 Bda-Chr1:34258875 Bda03g00205 Bda-Chr3:1615820 6.72E-43 dispersed
Bda14g00195 Bda-Chr14:1383906 Bda01g00700 Bda-Chr1:34258875 9.51E-19 dispersed
Bda01g01890 Bda-Chr1:55054785 Bda01g00700 Bda-Chr1:34258875 2.13E-90 transposed
Bda04g00267 Bda-Chr4:32616742 Bda01g00700 Bda-Chr1:34258875 1.27E-69 transposed
Bda04g00526 Bda-Chr4:53886332 Bda01g00700 Bda-Chr1:34258875 7.26E-53 transposed
Bda01g00700 Bda-Chr1:34258875 Bda13g01302 Bda-Chr13:35252857 3.96E-110 wgd
Bda01g00700 Bda-Chr1:34258875 Bda03g00035 Bda-Chr3:499383 3.61E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15388 PF03106 WRKY 1.10E-25 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00700 - - csv:101218039 427.557