Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00703 | ATGCCAGGATTGACTTGCAACGCCTGCAACAGGGAATTCATAGACGACGCGGAGCAAAAGCTCCATTACAAGTCCGAATGGCACCGCTATAATCTTAAGCGAAAGGTAGCTGGTGTTCCTGGTGTGACAGAAGCTTTATTTCTAGCTAGACAATCTGCAGTTTCACAGGAGAACATGAAGTCTAATGAAACCCCAATGTTGTACTCTTGTGGTCTCTGTGGAAAAGGATACAGAAGTTCCAAAGCTCATGCTCAGCATCTTAAATCAAGAAGTCATATAACACGAGCTTCTCAAGGATCCAATGAAGAAGATGAGACGGCTGTAATCAAGCCACTTGTTCGTAGAACCTCAAATAAGATTCCCCAACAAAAAGGATATAATGAAGAAAGTGATGAGAGTGAAGATGAGTGGGAGGAGGTTGACCCAGATGAAGATTTGGTTGGTGAGGCCACACAGTCCATGACTGGTATGAAGATGAAAGATGTTGATGGTGAGATGGATGACAACGATGACATTGAGGAGTTGGATCCATCGTGCTGCTTTATGTGTGACCTGGACCATGACACTATTGAGAGTTGTATGGTTCACATGCACAAGCAGCATGGTTTCTTCATTCCCGATGTCGATTATTTGAAGGACCCAGCAGGCCTGCTTGCTTATCTTAGCCTGAAGGTGAAGAGGGATTTCATGTGCCTCTACTGTAATGATAGGTGTCTTCCTTTTAATAGCTTGGAAGCAGTTAGAAAGCACATGACAGCAAAAAGCCACTGCAAAGTGCACTATGGTGATGATGATGAGGATGAGGACGCAGATTTGGAAGACTTCTACGATTACAGTAGCAGTTATGTGGATGAGAAAGGCAAAAAACTGGTAGTGGCTGGCGACTCGGTCAACTCTGTAGAACTTGGGAGTGGTGGGTCGGAGCTCATCATTACTAGAACATCTGATCGTGGAATCCTTACCAAAACACTTGGTTCCCGGGAGTTTTTGCGCTATTATCGTCAGAAACCACGCCCTATGAATTACACACCTCTAACTGCTGCATTGGCTTCTAGGTACAGGAGCATGGGATTGGCAACGATACAATCAAGGGAAGGAATGGTGAGGATGAAAGTGATGAAAGCTATGAATAGATCAGGAGTGGAAGCCATGCGCAACAAGATTGGAATGAAGAGCAACGTGATCAGAAACCTGCCTAAGAATGTTCCTTATTGA | 1215 | 44.53 | MPGLTCNACNREFIDDAEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSAVSQENMKSNETPMLYSCGLCGKGYRSSKAHAQHLKSRSHITRASQGSNEEDETAVIKPLVRRTSNKIPQQKGYNEESDESEDEWEEVDPDEDLVGEATQSMTGMKMKDVDGEMDDNDDIEELDPSCCFMCDLDHDTIESCMVHMHKQHGFFIPDVDYLKDPAGLLAYLSLKVKRDFMCLYCNDRCLPFNSLEAVRKHMTAKSHCKVHYGDDDEDEDADLEDFYDYSSSYVDEKGKKLVVAGDSVNSVELGSGGSELIITRTSDRGILTKTLGSREFLRYYRQKPRPMNYTPLTAALASRYRSMGLATIQSREGMVRMKVMKAMNRSGVEAMRNKIGMKSNVIRNLPKNVPY | 404 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 34321358 | 34323906 | + | Bda002741.1 | Bda01g00703 | 703 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00703 | 404 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 28 | IPR013087 | - | |
Bda01g00703 | 404 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 36 | IPR036236 | - | |
Bda01g00703 | 404 | SUPERFAMILY | beta-beta-alpha zinc fingers | 166 | 213 | IPR036236 | - | |
Bda01g00703 | 404 | PANTHER | ZINC FINGER PROTEIN 622 | 1 | 404 | IPR040025 | - | |
Bda01g00703 | 404 | SUPERFAMILY | beta-beta-alpha zinc fingers | 68 | 101 | IPR036236 | - | |
Bda01g00703 | 404 | MobiDBLite | consensus disorder prediction | 85 | 142 | - | - | |
Bda01g00703 | 404 | PANTHER | ZINC FINGER PROTEIN-RELATED | 1 | 404 | - | - | |
Bda01g00703 | 404 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 70 | 92 | IPR013087 | - | |
Bda01g00703 | 404 | SMART | c2h2final6 | 68 | 92 | IPR013087 | - | |
Bda01g00703 | 404 | SMART | c2h2final6 | 4 | 28 | IPR013087 | - | |
Bda01g00703 | 404 | SMART | c2h2final6 | 229 | 256 | IPR013087 | - | |
Bda01g00703 | 404 | Pfam | C2H2 type zinc-finger (2 copies) | 180 | 281 | IPR041661 | - | |
Bda01g00703 | 404 | SMART | ZnF_U1_5 | 65 | 99 | IPR003604 | GO:0003676|GO:0008270 | |
Bda01g00703 | 404 | SMART | ZnF_U1_5 | 1 | 35 | IPR003604 | GO:0003676|GO:0008270 | |
Bda01g00703 | 404 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 68 | 97 | IPR013087 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15389 | PF12756 | zf-C2H2_2 | 2.00E-25 | CL0361 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00703 | K14816 | - | zju:107420801 | 629.017 |