Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00704 ATGCCTCATAAGGTGAACTATGGAATTGCTTACGATGTTGACTATGATGAGTATAAAGATGATGGTTATAATTATGATTATGACTATGATTCGGACGAGGAAGATCAAGTAGGTGATACAGCCGAGTCTAGTCGATTAACTAAGGACCTTGGGATATGGCGTTGTTCCATTTGTACATATGATAATGATGAAAGCTTATCTGCGTGTGAGATATGTGAGGTTCTTCGAAATCCATTGGTCAACAATGGCAGCCAGAGAAGAGATTTCTTTTATGCAGTTGTGGGGTTATGCAAAGATTCTGGAGTGTCCATAATGGCCAAGTCTCTTTTTGCATCATCACCACGTGTCATTCCCAAAAAGGCTCTATTAGTGCCAGAGCAGAATGATGAATCTGAGACAAAAAAGAACAATAATCTCATCACGAGTGGGGATGTTTATGAAGTTCTCCACAAATTCCATAAAAGATTTAGTTTTTATAATTGTAGCTATACGAATATAGCTCCTTTCAAGTTTGATGTTCCATCACCTGACGACGTGGTTTCTTATGGATTGCATTCATCCAAATCGAATTTGAAAGCAAGCCACACATACTTAAAATCAGCAGACGCCTTTTCAGATACACGTGGCATTACAAGTTCTATAAAGGCAACTTATACTGCTGAAAGGTCTGATAGCACTGATTCCACAATGCCAAATAGCAGAGGAGATGGTTATAGAAAGGAGGCAGCAATTAATGCACAACCCAGTTTTGAAATTTCAGATGGTTTATCTACATCAAGAAGGAAAAGTGTAATAGTTCAAGCAGAGAAGATAAAGTTCTCTGAGAACTTGAGCATAGATGCAGGATCAGATAAAAGATCAGAGAGTTCATTTGCATTGTTGTCGACGGATGAAATTGTTGATATTAGCAGCAATTCTGCAATAAATCAACACAAGTTAAAAGGTCTTACTACTAGTTTGAACAATGTGGGTCTAGATGTTAGATCTCCATATTCAAATGTTACTGCTAAAGGAGCAGATATGCATGCTCAGTATGAACCTGAAAAGTGGATGCTACCTGATCAAGCTGTTGGTTCTTTGACTCAACTGAATCTTGCAATAGTTGGTCATGTTGACTCGGGAAAATCTACTCTTTCTGGTAGACTTCTACACTTATCAGGACAAATATCTCAAAAAGAAATGCACCAATATGAAAAAGAGGCAAAATTCAAGCAGGGCAAGGGGTCCTTTGCTTTTGCCTGGGCGTTGGATGAGAGTGCTGAAGAAAGAGAAAGAGGAATAACTATGACCGTTGGTGTTGCATATTTTGATTCTAAAAGATATCATATTGTGGTCCTCGACTCCCCAGGTCACAAAGATTTTGTTCCAAATATGATCTCTGGGGCCACACAAGCTGATGCTGCAATTCTTGTCATTGATGCCTCGGTTGGTGCGTTTGAAGCTGGCATGGATGGTGCCAAGGGACAAACAAAGGAGCACGCACAACTAATTAGAAGTTTTGGTGTTGACCAAATTATTGTTGCGGTTAACAAAATGGATGTGGTGGAGTATTCCAAGGATCGTTATGACTCTATTAAGCTGCAAATGGGTACATTCCTTCGTACATGTGGTTTTAAAGATTCTTCTATGTCTTGGATTCCATTGAGCGCCATGGGAAATCAAAATTTGGTGAGTGCCCCTTCTGACATCCGTCTCTCATCCTGGTATCGTGGACCTAATTTGTTGGAGGCAATTGATCTTTTTCAACCTCCAACTAGGGATTACTCAAAGCCTCTGCTTATGCCAATTTGTGATATTGTAAAAACACTTCCAATAGGACAAGTGTCTGTTTGTGGAAAATTGGAAGCTGGTGCTTTTCGAGTTGGATCTAAGGTTCTTGTTATGCCATCTGGTGCTATTGGAACATTGCGATCCTTAGAGCGTGATTCTCATGCTTGCACAGTTGCACGAGCTGGAGACAATGTGACTGTCAACCTTCAAGTCATCGATGAGAGTCATGTGAGGGCTGGGGGTGTACTTTGTCACCCTGATTTTCCTGTTGCCATTGCAAAACATTTGGAATTGAAAGTGCTTGTCTTGGATTTTGCAACCCCAATTTTAATTGGATCCCAGTTGACATATAATAATCTTTTACTCGATCCAAAGACTGGAAAGACTATGAAGAAGGCTCCTCGCATTCTCATCCCCAAGCAAACTGCCATTATTGAGGTAGTATTACATGGTCCTGTGTGCGTTGAAGCGTTCTCAACGAGTAAAGCTCTTGGGAGGATATTTCTACGAGCATTAGGAAGAACAGTTGCAGTTGGGGTCATTACCCGAATAATTGAAGCGCCGGGATAA 2340 40.47 MPHKVNYGIAYDVDYDEYKDDGYNYDYDYDSDEEDQVGDTAESSRLTKDLGIWRCSICTYDNDESLSACEICEVLRNPLVNNGSQRRDFFYAVVGLCKDSGVSIMAKSLFASSPRVIPKKALLVPEQNDESETKKNNNLITSGDVYEVLHKFHKRFSFYNCSYTNIAPFKFDVPSPDDVVSYGLHSSKSNLKASHTYLKSADAFSDTRGITSSIKATYTAERSDSTDSTMPNSRGDGYRKEAAINAQPSFEISDGLSTSRRKSVIVQAEKIKFSENLSIDAGSDKRSESSFALLSTDEIVDISSNSAINQHKLKGLTTSLNNVGLDVRSPYSNVTAKGADMHAQYEPEKWMLPDQAVGSLTQLNLAIVGHVDSGKSTLSGRLLHLSGQISQKEMHQYEKEAKFKQGKGSFAFAWALDESAEERERGITMTVGVAYFDSKRYHIVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAFEAGMDGAKGQTKEHAQLIRSFGVDQIIVAVNKMDVVEYSKDRYDSIKLQMGTFLRTCGFKDSSMSWIPLSAMGNQNLVSAPSDIRLSSWYRGPNLLEAIDLFQPPTRDYSKPLLMPICDIVKTLPIGQVSVCGKLEAGAFRVGSKVLVMPSGAIGTLRSLERDSHACTVARAGDNVTVNLQVIDESHVRAGGVLCHPDFPVAIAKHLELKVLVLDFATPILIGSQLTYNNLLLDPKTGKTMKKAPRILIPKQTAIIEVVLHGPVCVEAFSTSKALGRIFLRALGRTVAVGVITRIIEAPG 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34325974 34336688 - Bda002742.2 Bda01g00704 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00704 779 SMART zf_4 51 75 IPR001876 -
Bda01g00704 779 Gene3D Translation factors 682 776 - -
Bda01g00704 779 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 684 775 IPR009001 -
Bda01g00704 779 PRINTS GTP-binding elongation factor signature 444 454 IPR000795 GO:0003924|GO:0005525
Bda01g00704 779 PRINTS GTP-binding elongation factor signature 424 432 IPR000795 GO:0003924|GO:0005525
Bda01g00704 779 PRINTS GTP-binding elongation factor signature 364 377 IPR000795 GO:0003924|GO:0005525
Bda01g00704 779 PRINTS GTP-binding elongation factor signature 505 514 IPR000795 GO:0003924|GO:0005525
Bda01g00704 779 PRINTS GTP-binding elongation factor signature 460 471 IPR000795 GO:0003924|GO:0005525
Bda01g00704 779 PANTHER OS04G0595300 PROTEIN 54 776 - -
Bda01g00704 779 CDD EF1_alpha 364 584 - -
Bda01g00704 779 PANTHER TRANSLATION FACTOR 54 776 - -
Bda01g00704 779 Pfam Elongation factor Tu C-terminal domain 711 774 IPR004160 -
Bda01g00704 779 Gene3D - 43 82 - -
Bda01g00704 779 ProSiteProfiles Zinc finger RanBP2 type profile. 49 78 IPR001876 -
Bda01g00704 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 601 IPR027417 -
Bda01g00704 779 ProSitePatterns Zinc finger RanBP2-type signature. 53 72 IPR001876 -
Bda01g00704 779 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 360 592 IPR000795 GO:0003924|GO:0005525
Bda01g00704 779 SUPERFAMILY Ran binding protein zinc finger-like 51 76 IPR036443 -
Bda01g00704 779 Pfam Elongation factor Tu GTP binding domain 363 580 IPR000795 GO:0003924|GO:0005525
Bda01g00704 779 Gene3D - 356 584 IPR027417 -
Bda01g00704 779 Gene3D Translation factors 588 678 - -
Bda01g00704 779 SUPERFAMILY Translation proteins 583 678 IPR009000 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00704 Bda-Chr1:34325974 Bda15g00380 Bda-Chr15:6732927 7.05E-85 dispersed
Bda13g01045 Bda-Chr13:12195676 Bda01g00704 Bda-Chr1:34325974 1.23E-44 dispersed
Bda01g00704 Bda-Chr1:34325974 Bda09g01471 Bda-Chr9:46517877 3.57E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00704 K14416 - zju:107420808 883.248